RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SCAMP5Q8TAC9 235 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 PPP1R14CQ8TAE6 165 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 CSGALNACT1Q8TDX6 532 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 NMD3Q96D46 503 aaKnown RBP7.99□□□□□ -1.13
NECAP1-220ENST00000639841 FNBP1Q96RU3 617 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 NECTIN3Q9NQS3 549 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 EIF2B3Q9NR50 452 aaKnown RBP7.99□□□□□ -1.13
NECAP1-220ENST00000639841 TRMT112Q9UI30 125 aaKnown RBP7.99□□□□□ -1.13
NECAP1-220ENST00000639841 TSPYL4Q9UJ04 414 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 DUOX1Q9NRD9 1551 aa7.99□□□□□ -1.13
NECAP1-220ENST00000639841 CLCA1A8K7I4 914 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 GTPBP1O00178 669 aaKnown RBP7.98□□□□□ -1.13
NECAP1-220ENST00000639841 IPO8O15397 1037 aaKnown RBP7.98□□□□□ -1.13
NECAP1-220ENST00000639841 SLC22A3O75751 556 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 ENDOD1O94919 500 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 MT-ND5P03915 603 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 TK1P04183 234 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 TYRP14679 529 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 LIMK1P53667 647 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 EVCP57679 992 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 LSAMPQ13449 338 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 NR0B2Q15466 257 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 TMEM266Q2M3C6 531 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 VWA3BQ502W6 1294 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 SPRYD7Q5W111 196 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 RCSD1Q6JBY9 416 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 KLHL17Q6TDP4 642 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 PXKQ7Z7A4 578 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 TTC7BQ86TV6 843 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 RAB11FIP4Q86YS3 637 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 CEP95Q96GE4 821 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 ZNF764Q96H86 408 aaPredicted RBP7.98□□□□□ -1.13
NECAP1-220ENST00000639841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.98□□□□□ -1.13
NECAP1-220ENST00000639841 COMMD8Q9NX08 183 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 RNF186Q9NXI6 227 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 CLCA2Q9UQC9 943 aa7.98□□□□□ -1.13
NECAP1-220ENST00000639841 ADAM11O75078 769 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 DGKIO75912 1065 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 RAD17O75943 681 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 PLATP00750 562 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TUBB4AP04350 444 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 CELA3BP08861 270 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 BCL6P41182 706 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 MCAMP43121 646 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 MSH2P43246 934 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 KCNC1P48547 511 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 ALDH3A2P51648 485 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TPD52P55327 224 aaPredicted RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 C17orf67Q0P5P2 114 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 GALNT2Q10471 571 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TRIM28Q13263 835 aaKnown RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 SLMAPQ14BN4 828 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TBCEQ15813 527 aaPredicted RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 PSAPL1Q6NUJ1 521 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 H1FNTQ75WM6 255 aaPredicted RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 LRRC71Q8N4P6 559 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 MFSD2AQ8NA29 543 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 SH3RF3Q8TEJ3 882 aaPredicted RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 CHAMP1Q96JM3 812 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 SAMD11Q96NU1 681 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 SLC12A9Q9BXP2 914 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TWSG1Q9GZX9 223 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 RASAL2Q9UJF2 1139 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TBX20Q9UMR3 447 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 COG5Q9UP83 839 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 IRS2Q9Y4H2 1338 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 USP2O75604 605 aaPredicted RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 LRIG2O94898 1065 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 GUCA1CO95843 209 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 ITGA2BP08514 1039 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 GNAT1P11488 350 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 NNMTP40261 264 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 FLT3LGP49771 235 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 INHBEP58166 350 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 ACTR2P61160 394 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 RBP5P82980 135 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 CTBSQ01459 385 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 PPP3CAQ08209 521 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TFCP2Q12800 502 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TBCCQ15814 346 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 DBN1Q16643 649 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 DUSP28Q4G0W2 176 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 FIGNQ5HY92 759 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 LETMD1Q6P1Q0 360 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 FBXO46Q6PJ61 603 aaPredicted RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 DCLRE1AQ6PJP8 1040 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 UNQ6494/PRO21346Q6UXR6 183 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 CCDC73Q6ZRK6 1079 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 VSIG10LQ86VR7 867 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 SRBD1Q8N5C6 995 aaKnown RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 UTP15Q8TED0 518 aaKnown RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 TNFRSF25Q93038 417 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 FAM120BQ96EK7 910 aaKnown RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 LRRC46Q96FV0 321 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 P2RX7Q99572 595 aaKnown RBP7.97□□□□□ -1.13
NECAP1-220ENST00000639841 MYL10Q9BUA6 226 aa7.97□□□□□ -1.13
NECAP1-220ENST00000639841 WNT8AQ9H1J5 351 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms