RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SLC27A3Q5K4L6 730 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF227Q86WZ6 799 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 SGF29Q96ES7 293 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HEMGNQ9BXL5 484 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF717Q9BY31 904 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 TNKS2Q9H2K2 1166 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ALG13Q9NP73 1137 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 STK17AQ9UEE5 414 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 VPS28Q9UK41 221 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 IFT52Q9Y366 437 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PCDHA5Q9Y5H7 936 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MYOM3Q5VTT5 1437 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM120BA0PK00 339 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 A8MX80 341 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 DDX39AO00148 427 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM16O95361 564 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 FAM228BP0C875 321 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 SRGAP2BP0DMP2 458 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 RAB4AP20338 218 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MAT2AP31153 395 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 NUDT1P36639 197 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 LPIN1Q14693 890 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 RGS21Q2M5E4 152 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CNPY1Q3B7I2 92 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HDDC2Q7Z4H3 204 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 KCTD20Q7Z5Y7 419 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CBARPQ8N350 705 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF366Q8N895 744 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 POF1BQ8WVV4 589 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 KRT35Q92764 455 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PHKBQ93100 1093 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 C7orf34Q96L11 122 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF570Q96NI8 536 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 DCLK3Q9C098 648 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 COQ3Q9NZJ6 369 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CEP72Q9P209 647 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 UVRAGQ9P2Y5 699 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 KLHL3Q9UH77 587 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 RNF112Q9ULX5 631 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ESYT3A0FGR9 886 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CASP5P51878 434 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 UBE2HP62256 183 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PRAMEP78395 509 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CHAF1BQ13112 559 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 NFYCQ13952 458 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MRPL58Q14197 206 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 GSTA3Q16772 222 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 RNF220Q5VTB9 566 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CACHD1Q5VU97 1274 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 AFMIDQ63HM1 303 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PHC2Q8IXK0 858 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 SCFD2Q8WU76 684 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF560Q96MR9 790 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 KLHL1Q9NR64 748 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ABI2Q9NYB9 513 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 GPRC5BQ9NZH0 403 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MPP6Q9NZW5 540 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 STOML2Q9UJZ1 356 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 COQ6Q9Y2Z9 468 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 POGZQ7Z3K3 1410 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 WIZO95785 1651 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PRPF3O43395 683 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 QDPRP09417 244 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 NMT1P30419 496 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 GP5P40197 560 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MLLT3P42568 568 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HTR3AP46098 478 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 NPEPPSP55786 919 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 KCNAB2Q13303 367 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HIC1Q14526 733 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 SPATS1Q496A3 300 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 SNAP47Q5SQN1 464 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MARK2Q7KZI7 788 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 UBR7Q8N806 425 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 RIN3Q8TB24 985 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HCAR2Q8TDS4 363 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CAPSLQ8WWF8 208 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HDAC11Q96DB2 347 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MAN1C1Q9NR34 630 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MTMR4Q9NYA4 1195 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 IMPACTQ9P2X3 320 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 TRMT6Q9UJA5 497 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MID2Q9UJV3 735 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 GPR34Q9UPC5 381 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 INVSQ9Y283 1065 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ABCA10Q8WWZ4 1543 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 E9PBE3 544 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PPIP5K2O43314 1243 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PLEKHA8P1O95397 391 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 TCP1P17987 556 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PKLRP30613 574 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ACSL1P33121 698 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 FXR1P51114 621 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF75DP51815 510 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PTGISQ16647 500 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HES5Q5TA89 166 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 IQSEC1Q6DN90 963 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 LRRC8AQ8IWT6 810 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 BBS5Q8N3I7 341 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 VANGL1Q8TAA9 524 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms