RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CLDN5O00501 218 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 ZNF263O14978 683 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 KIAA0391O15091 583 aaKnown RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 PDGFRBP09619 1106 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 TMEM191BP0C7N4 346 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 DLATP10515 647 aaKnown RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 ARSAP15289 507 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 CTHP32929 405 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MLLT6P55198 1093 aaPredicted RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 CDH8P55286 799 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MCCD1P59942 119 aaPredicted RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 CSTF1Q05048 431 aaKnown RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 TYRO3Q06418 890 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SMARCB1Q12824 385 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 DPYDQ12882 1025 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 CCINQ13939 588 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 CAMK4Q16566 473 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 DUOXA2Q1HG44 320 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MAMSTRQ6ZN01 415 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 DPH6Q7L8W6 267 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 METTL23Q86XA0 190 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 DCP1BQ8IZD4 617 aaKnown RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 FMR1NBQ8N0W7 255 aaPredicted RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 TMEM86AQ8N2M4 240 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MAB21L3Q8N8X9 362 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 XXYLT1Q8NBI6 393 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SPATA18Q8TC71 538 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 CACTINQ8WUQ7 758 aaKnown RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 IRF7Q92985 503 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 CCDC127Q96BQ5 260 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 TIGD1Q96MW7 591 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SYT15Q9BQS2 421 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 BCO2Q9BYV7 579 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 GPR88Q9GZN0 384 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SLITRK6Q9H5Y7 841 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SMYD3Q9H7B4 428 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 LMAN1LQ9HAT1 526 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MAGEF1Q9HAY2 307 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SPATA6Q9NWH7 488 aaPredicted RBP8.39□□□□□ -1.07
PNKP-229ENST00000637897 OBP2AQ9NY56 170 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MYOFQ9NZM1 2061 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 MYO16Q9Y6X6 1858 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 SPTBN2O15020 2390 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 HUS1O60921 280 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 TACC1O75410 805 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
PNKP-229ENST00000637897 BDNFP23560 247 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 CDC25CP30307 473 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 MAGEA11P43364 429 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 LHX1P48742 406 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 AMPD3Q01432 767 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 MESP2Q0VG99 397 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 ZNF77Q15935 545 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
PNKP-229ENST00000637897 ZNF528Q3MIS6 628 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 ZCWPW2Q504Y3 356 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 FSTL4Q6MZW2 842 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 ITIH5Q86UX2 942 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 MON1AQ86VX9 555 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 RNF214Q8ND24 703 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 ZMIZ2Q8NF64 920 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 FAM200AQ8TCP9 573 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 BPIFB1Q8TDL5 484 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 WBP2Q969T9 261 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 P2RY11Q96G91 374 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 TRMT2BQ96GJ1 504 aaKnown RBP8.38□□□□□ -1.07
PNKP-229ENST00000637897 ANKRD36BP1Q96IX9 119 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 PDLIM2Q96JY6 352 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 TTLL2Q9BWV7 592 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 B3GNT5Q9BYG0 378 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 ZNF518BQ9C0D4 1074 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 RNF38Q9H0F5 515 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 LINC00597Q9H2U6 94 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 EBF3Q9H4W6 596 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 VRTNQ9H8Y1 702 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 APOBEC3GQ9HC16 384 aaKnown RBP8.38□□□□□ -1.07
PNKP-229ENST00000637897 GKN1Q9NS71 199 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 HMGXB4Q9UGU5 601 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 FBXO4Q9UKT5 387 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 CDH9Q9ULB4 789 aa8.38□□□□□ -1.07
PNKP-229ENST00000637897 MAGED2Q9UNF1 606 aaPredicted RBP8.38□□□□□ -1.07
PNKP-229ENST00000637897 EML5Q05BV3 1969 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 F8VP50 259 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 TULP1O00294 542 aaPredicted RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 MAN2B1O00754 1011 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 HRO43593 1189 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 AKAP3O75969 853 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 BEST1O76090 585 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 RHOBTB3O94955 611 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 ZNF202O95125 648 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 OLFM2O95897 454 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 LMNAP02545 664 aaKnown RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 RPN1P04843 607 aaKnown RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 CSH1P0DML2 217 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 CSH2P0DML3 217 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms