RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-215	ENST00000637657	AGPAT3	Q9NRZ7	376 aa		13.65	□□□□□ -0.22
PCCA-215	ENST00000637657	IGSF9	Q9P2J2	1179 aa		13.65	□□□□□ -0.22
PCCA-215	ENST00000637657	CEPT1	Q9Y6K0	416 aa		13.65	□□□□□ -0.22
PCCA-215	ENST00000637657	LIAS	O43766	372 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	DNAJA2	O60884	412 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	ESRRB	O95718	433 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SRGAP2C	P0DJJ0	459 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SRGAP2B	P0DMP2	458 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PRDX6	P30041	224 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	HAL	P42357	657 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	VCP	P55072	806 aa	Known RBP	13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SNRPF	P62306	86 aa	Known RBP	13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	TLR1	Q15399	786 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	ZNF423	Q2M1K9	1284 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	ARC	Q7LC44	396 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	NLRX1	Q86UT6	975 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	KBTBD6	Q86V97	674 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	ZNF677	Q86XU0	584 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SLC15A3	Q8IY34	581 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PQLC1	Q8N2U9	271 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	TERB1	Q8NA31	727 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SHC3	Q92529	594 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PRR11	Q96HE9	360 aa	Predicted RBP	13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	INIP	Q9NRY2	104 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SLC17A7	Q9P2U7	560 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	MTMR7	Q9Y216	660 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	4e-6	■■■■■ 143.3
PCCA-215	ENST00000637657	SLIT2	O94813	1529 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	MYH14	Q7Z406	1995 aa	Known RBP	13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	FAM237B	A0A1B0GVD1	139 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657		E7ESA3	106 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PROSC	O94903	275 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	LDHC	P07864	332 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SNHG28	P0DPA3	235 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	FDX1	P10109	184 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	RAG1	P15918	1043 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	BGN	P21810	368 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	HMOX2	P30519	316 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PTPN7	P35236	360 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PHKA2	P46019	1235 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	ARSE	P51690	589 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SPIRE1	Q08AE8	756 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	CCNI	Q14094	377 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	RABGAP1L	Q5R372	815 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	LGSN	Q5TDP6	509 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	WDR75	Q8IWA0	830 aa	Known RBP	13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	DEPTOR	Q8TB45	409 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	DCAKD	Q8WVC6	231 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	TTC17	Q96AE7	1141 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	COA7	Q96BR5	231 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	HSPBAP1	Q96EW2	488 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	DYNLL2	Q96FJ2	89 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	DHX33	Q9H6R0	707 aa	Known RBP	13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	PSTPIP2	Q9H939	334 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	SCN4A	P35499	1836 aa		13.64	□□□□□ -0.23
PCCA-215	ENST00000637657	DDX60L	Q5H9U9	1706 aa	Known RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	ITM2A	O43736	263 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	ITGAV	P06756	1048 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	NCOA4	Q13772	614 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	INA	Q16352	499 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	CLPP	Q16740	277 aa	Predicted RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	SUSD4	Q5VX71	490 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	C12orf56	Q8IXR9	622 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	PPIL6	Q8IXY8	311 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	E2F7	Q96AV8	911 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	CLPTM1L	Q96KA5	538 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	BTBD6	Q96KE9	485 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	SNX27	Q96L92	541 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	SERPINI1	Q99574	410 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	MRPL47	Q9HD33	250 aa	Known RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	TMOD2	Q9NZR1	351 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	CDH22	Q9UJ99	828 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	EFR3B	Q9Y2G0	817 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	INPP5F	Q9Y2H2	1132 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	FAM32A	Q9Y421	112 aa	Known RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	GOLGA8T	H3BQL2	631 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	FBP2	O00757	339 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	ATMIN	O43313	823 aa	Predicted RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	TBC1D12	O60347	775 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	SGPL1	O95470	568 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	C8B	P07358	591 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	POLR2M	P0CAP2	368 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	TRIM49	P0CI25	452 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	TRIM49C	P0CI26	452 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	SPATA31C1	P0DKV0	1188 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	CYP11B1	P15538	503 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	MCCD1	P59942	119 aa	Predicted RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	GPS1	Q13098	491 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	SEPT6	Q14141	434 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	LRRC36	Q1X8D7	754 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	GPATCH4	Q5T3I0	446 aa	Known RBP	13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	ENOSF1	Q7L5Y1	443 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	RCOR2	Q8IZ40	523 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	MYCT1	Q8N699	235 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	DLG3	Q92796	817 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	CASP10	Q92851	521 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	FAM111A	Q96PZ2	611 aa		13.63	□□□□□ -0.23
PCCA-215	ENST00000637657	GCNA	Q96QF7	691 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms