RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PROSCO94903 275 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 ERBB2P04626 1255 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 ITGB1P05556 798 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 NPR3P17342 541 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 ITGB8P26012 769 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 CTNNA2P26232 953 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 ADORA2BP29275 332 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 TKTP29401 623 aaKnown RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 GATMP50440 423 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 WDR5P61964 334 aaKnown RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 TUBB4BP68371 445 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 TSPY1Q01534 308 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 PDE4CQ08493 712 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.187e-7■□□□□ 9.4
CLN6-219ENST00000637329 MESDQ14696 234 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 CLUL1Q15846 466 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 MDH1BQ5I0G3 518 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLN6-219ENST00000637329 ZNF572Q7Z3I7 529 aaPredicted RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 TMEM110Q86TL2 294 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 FAM35AQ86V20 835 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 C7orf61Q8IZ16 206 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 FUKQ8N0W3 1084 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 UBL4BQ8N7F7 174 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 NIPA2Q8N8Q9 360 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 UBA3Q8TBC4 463 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 RABGGTAQ92696 567 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 TOP1MTQ969P6 601 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 PBKQ96KB5 322 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 HSFY1Q96LI6 401 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 RTP3Q9BQQ7 232 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 OXCT2Q9BYC2 517 aaPredicted RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 UBE2OQ9C0C9 1292 aaKnown RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 RC3H2Q9HBD1 1191 aaKnown RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 CRTAC1Q9NQ79 661 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 PRKAG2Q9UGJ0 569 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 IP6K2Q9UHH9 426 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 PRG3Q9Y2Y8 225 aaPredicted RBP16.19■□□□□ 0.18
CLN6-219ENST00000637329 ALG6Q9Y672 507 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 FAM170AA1A519 330 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 SIGLEC16A6NMB1 481 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 E5RJQ4 531 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 I3L4J1 428 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 SPOPO43791 374 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 TADA2AO75478 443 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 OAZ2O95190 189 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 ALDH2P05091 517 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 FAM200BP0CF97 657 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 ACAT1P24752 427 aaKnown RBP16.18■□□□□ 0.18
CLN6-219ENST00000637329 CTNNA1P35221 906 aaKnown RBP16.18■□□□□ 0.18
CLN6-219ENST00000637329 SLC11A1P49279 550 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 ITIH3Q06033 890 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 C2CD6Q53TS8 623 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 CYP4A22Q5TCH4 519 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 FAM171BQ6P995 826 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 DCUN1D2Q6PH85 259 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 CD101Q93033 1021 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 SMARCD1Q96GM5 515 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 MCEEQ96PE7 176 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 PKMYT1Q99640 499 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 CARD9Q9H257 536 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 GOLPH3Q9H4A6 298 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 ST7Q9NRC1 585 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 MARCH5Q9NX47 278 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
CLN6-219ENST00000637329 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
CLN6-219ENST00000637329 TIMM13Q9Y5L4 95 aaPredicted RBP16.18■□□□□ 0.18
CLN6-219ENST00000637329 ALPK3Q96L96 1907 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 F8W810 466 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 PSTPIP1O43586 416 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 KRT3P12035 628 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 COMTP21964 271 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 PIGHQ14442 188 aaPredicted RBP16.17■□□□□ 0.18
CLN6-219ENST00000637329 KIAA0319Q5VV43 1072 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 PMF1Q6P1K2 205 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 LLGL2Q6P1M3 1020 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 OLFML1Q6UWY5 402 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 C4orf50Q6ZRC1 276 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 ARCQ7LC44 396 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 CMTR2Q8IYT2 770 aaKnown RBP16.17■□□□□ 0.18
CLN6-219ENST00000637329 KCTD13Q8WZ19 329 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 MYLPFQ96A32 169 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 ZNF689Q96CS4 500 aaPredicted RBP16.17■□□□□ 0.18
CLN6-219ENST00000637329 MED10Q9BTT4 135 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 CARD6Q9BX69 1037 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 PNPLA8Q9NP80 782 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 KRT82Q9NSB4 513 aa16.17■□□□□ 0.18
CLN6-219ENST00000637329 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
CLN6-219ENST00000637329 PACSIN2Q9UNF0 486 aaPredicted RBP16.17■□□□□ 0.18
CLN6-219ENST00000637329 CTAGE15A4D2H0 777 aa16.16■□□□□ 0.18
CLN6-219ENST00000637329 OR6C75A6NL08 312 aa16.16■□□□□ 0.18
CLN6-219ENST00000637329 TMEM110-MUSTN1A8MSY1 372 aa16.16■□□□□ 0.18
CLN6-219ENST00000637329 EFCAB8A8MWE9 144 aa16.16■□□□□ 0.18
CLN6-219ENST00000637329 KCNK3O14649 394 aa16.16■□□□□ 0.18
CLN6-219ENST00000637329 DDX3YO15523 660 aaKnown RBP16.16■□□□□ 0.18
CLN6-219ENST00000637329 CTIFO43310 598 aaKnown RBP16.16■□□□□ 0.18
CLN6-219ENST00000637329 ATP2C2O75185 946 aa16.16■□□□□ 0.18
CLN6-219ENST00000637329 TADA3O75528 432 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms