RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ABHD2	P08910	425 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MAPT	P10636	758 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	AMPD1	P23109	780 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	NFKBIA	P25963	317 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SFN	P31947	248 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	COIL	P38432	576 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	PSMC6	P62333	389 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	COG7	P83436	770 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CACNB1	Q02641	598 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CREB5	Q02930	508 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CTTN	Q14247	550 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	NADK2	Q4G0N4	442 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	OTOA	Q7RTW8	1153 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	TDRP	Q86YL5	185 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	RELL1	Q8IUW5	271 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CDAN1	Q8IWY9	1227 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SRRM1	Q8IYB3	904 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	AHI1	Q8N157	1196 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MYCT1	Q8N699	235 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	GIPC3	Q8TF64	312 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MAML1	Q92585	1016 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	EFHD2	Q96C19	240 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	LXN	Q9BS40	222 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	HGH1	Q9BTY7	390 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	RUSC1	Q9BVN2	902 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	ZNF696	Q9H7X3	374 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	PPCS	Q9HAB8	311 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SSU72	Q9NP77	194 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	QPCTL	Q9NXS2	382 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	UVRAG	Q9P2Y5	699 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	DKK3	Q9UBP4	350 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MTUS1	Q9ULD2	1270 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	TSC22D4	Q9Y3Q8	395 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	UBIAD1	Q9Y5Z9	338 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	GTPBP10	A4D1E9	387 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SOBP	A7XYQ1	873 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	TM7SF2	O76062	418 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SLITRK3	O94933	977 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	LYPLA2	O95372	231 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	TGDS	O95455	350 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	TAL1	P17542	331 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	PTPN2	P17706	415 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	STIP1	P31948	543 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	HADHB	P55084	474 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	NUP107	P57740	925 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CDK16	Q00536	496 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	KRT76	Q01546	638 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MSLN	Q13421	630 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CAMK2B	Q13554	666 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MTMR1	Q13613	665 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MTMR2	Q13614	643 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MMEL1	Q495T6	779 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	IL23R	Q5VWK5	629 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	C16orf87	Q6PH81	154 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CCDC137	Q6PK04	289 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	B3GNT9	Q6UX72	402 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	RIPOR1	Q6ZS17	1223 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	C1orf186	Q6ZWK4	172 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	DHDDS	Q86SQ9	333 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	FAM178B	Q8IXR5	827 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	PEX5L	Q8IYB4	626 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	GLIS3	Q8NEA6	775 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	ZFP28	Q8NHY6	868 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CYP2W1	Q8TAV3	490 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	MORC4	Q8TE76	937 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	CLEC4D	Q8WXI8	215 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SKA1	Q96BD8	255 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	FAM161B	Q96MY7	647 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	UIMC1	Q96RL1	719 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	OSBPL6	Q9BZF3	934 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	DRC3	Q9H069	523 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	PARVB	Q9HBI1	364 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	S100A14	Q9HCY8	104 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	AAAS	Q9NRG9	546 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	UBAP1	Q9NZ09	502 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	ZNF112	Q9UJU3	913 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	TDRKH	Q9Y2W6	561 aa	Known RBP	11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	GIT1	Q9Y2X7	761 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	COQ6	Q9Y2Z9	468 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	SRCAP	Q6ZRS2	3230 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	CFAP69	A5D8W1	941 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	IQCA1L	A6NCM1	817 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	CCDC160	A6NGH7	325 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	RASA4B	C9J798	803 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	EIF3F	O00303	357 aa	Predicted RBP	11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	RASA4	O43374	803 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	BAIAP3	O94812	1187 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	ACSL3	O95573	720 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	BAG2	O95816	211 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	CCND2	P30279	289 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	PSMC2	P35998	433 aa	Known RBP	11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	BCAP31	P51572	246 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	NR1H2	P55055	460 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	BACE1	P56817	501 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	UBXN2A	P68543	259 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	ARID5A	Q03989	594 aa		11.25	□□□□□ -0.61
CHD2-223	ENST00000636306	KRT81	Q14533	505 aa		11.25	□□□□□ -0.61

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