RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 NR1D1P20393 614 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 RPL21P46778 160 aaKnown RBP16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 SOX4Q06945 474 aaPredicted RBP16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 SGO2Q562F6 1265 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 FBXO25Q8TCJ0 367 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 CISHQ9NSE2 258 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 PARVAQ9NVD7 372 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 DERAQ9Y315 318 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 SCN5AQ14524 2016 aa16.54■□□□□ 0.24
CHRNA7-212ENST00000636271 ENPP3O14638 875 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 PPEF2O14830 753 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 PSTPIP1O43586 416 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 MMP8P22894 467 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 GNGT1P63211 74 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 FAM189BP81408 668 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 NT5DC4Q86YG4 428 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 RHOT1Q8IXI2 618 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 SEPT8Q92599 483 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 SLCO2A1Q92959 643 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 FTHL17Q9BXU8 183 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 CITO14578 2027 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 KIAA0355O15063 1070 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 ECEL1O95672 775 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 LSM8O95777 96 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 POLR2BP30876 1174 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 KCNJ1P48048 391 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 LLGL1Q15334 1064 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 SMYD5Q6GMV2 418 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 HACE1Q8IYU2 909 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 FEZF2Q8TBJ5 459 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 CENPHQ9H3R5 247 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 MTRF1LQ9UGC7 380 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 GIT1Q9Y2X7 761 aa16.53■□□□□ 0.24
CHRNA7-212ENST00000636271 TRIP11Q15643 1979 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 EIF3HO15372 352 aaKnown RBP eCLIP16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 TIMP1P01033 207 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 BRD2P25440 801 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 ASPAP45381 313 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 ATP1A2P50993 1020 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 SCNN1GP51170 649 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 PMS2P54278 862 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 EIF3BP55884 814 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 DAB2IPQ5VWQ8 1189 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 C1orf54Q8WWF1 131 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 RSAD1Q9HA92 442 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 CACNG4Q9UBN1 327 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 UBQLN1Q9UMX0 589 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 AGAP1Q9UPQ3 857 aa16.52■□□□□ 0.24
CHRNA7-212ENST00000636271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 CALB1P05937 261 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 WEE2P0C1S8 567 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 MAN1A1P33908 653 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 YWHAEP62258 255 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 PPP1R7Q15435 360 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 TMEM35BQ8NCS4 154 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 APBB2Q92870 758 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 FAM129AQ9BZQ8 928 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 ZNF518BQ9C0D4 1074 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 IP6K2Q9UHH9 426 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 ITGA11Q9UKX5 1188 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 FGFR1P11362 822 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 SKIP12755 728 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 CSF2RAP15509 400 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 IGFBP6P24592 240 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 TAS2R40P59535 323 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 CLLU1OSQ5K130 101 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 SCARA5Q6ZMJ2 495 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 KATNAL2Q8IYT4 538 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 BEST2Q8NFU1 509 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 PGBD4Q96DM1 585 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 PCDHGC3Q9UN70 934 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 TANC1Q9C0D5 1861 aa16.51■□□□□ 0.23
CHRNA7-212ENST00000636271 O00370 1275 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 EOMESO95936 686 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 POMCP01189 267 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 RAG1P15918 1043 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 RBP5P82980 135 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 KRT17Q04695 432 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 PDCLQ13371 301 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 SNX1Q13596 522 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 AGBL2Q5U5Z8 902 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 C9orf57Q5W0N0 161 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 FOXR1Q6PIV2 292 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 ART4Q93070 314 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 HERPUD2Q9BSE4 406 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 EPB41L4BQ9H329 900 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 CHST7Q9NS84 486 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 POLIQ9UNA4 740 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 USTQ9Y2C2 406 aa16.5■□□□□ 0.23
CHRNA7-212ENST00000636271 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms