RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 ZNF516Q92618 1163 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 RMDN1Q96DB5 314 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 SLC22A12Q96S37 553 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 CGRRF1Q99675 332 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 BLZF1Q9H2G9 400 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 CRTAC1Q9NQ79 661 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 HPS4Q9NQG7 708 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 GKN1Q9NS71 199 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 C2orf42Q9NWW7 574 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 THG1LQ9NWX6 298 aaKnown RBP7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 RCOR1Q9UKL0 485 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 CDH9Q9ULB4 789 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 MAGED2Q9UNF1 606 aaPredicted RBP7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 SMG5Q9UPR3 1016 aaKnown RBP7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 NME7Q9Y5B8 376 aa7.84□□□□□ -1.15
CACNA1A-222ENST00000636022 CLIC2O15247 247 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 PDGFRBP09619 1106 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 FAM163BP0C2L3 166 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 SLFN14P0C7P3 912 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 DLATP10515 647 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 TGM1P22735 817 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 HOXA6P31267 233 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 HOXC13P31276 330 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 ME1P48163 572 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CYP2J2P51589 502 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 PSMC1P62191 440 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 DNM1Q05193 864 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 DMWDQ09019 674 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 RUNX3Q13761 415 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 LRRC32Q14392 662 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 PON2Q15165 354 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 TMEM196Q5HYL7 178 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 TRIM68Q6AZZ1 485 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 VSTM1Q6UX27 236 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 ERMP1Q7Z2K6 904 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 SPATA2LQ8IUW3 424 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 HSCBQ8IWL3 235 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 NELFCDQ8IXH7 590 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 GRAMD1CQ8IYS0 662 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 SYNPOQ8N3V7 929 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 XXYLT1Q8NBI6 393 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 PLEKHO2Q8TD55 490 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 TMEM174Q8WUU8 243 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 MRPS31Q92665 395 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 MYLPFQ96A32 169 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CCDC127Q96BQ5 260 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 SPATA17Q96L03 361 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CEP295NLQ96MC4 621 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CYP2S1Q96SQ9 504 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 SYT15Q9BQS2 421 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 XYLT2Q9H1B5 865 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 EBF3Q9H4W6 596 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 KIF9Q9HAQ2 790 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 SLC39A2Q9NP94 309 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 FAM13BQ9NYF5 915 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 GCNT4Q9P109 453 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CGNQ9P2M7 1197 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 UXTQ9UBK9 157 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CFAP45Q9UL16 551 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 CIZ1Q9ULV3 898 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 HELZP42694 1942 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 RALGAPA1Q6GYQ0 2036 aa7.83□□□□□ -1.16
CACNA1A-222ENST00000636022 MYOFQ9NZM1 2061 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 TRDMT1O14717 391 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 HRO43593 1189 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 ACTN4O43707 911 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 TACC1O75410 805 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 STAU1O95793 577 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 TNNI1P19237 187 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 BDNFP23560 247 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 GNL1P36915 607 aaPredicted RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 AFMP43652 599 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 USP46P62068 366 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 CLDN10P78369 228 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 STK4Q13043 487 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 PPP2R5DQ14738 602 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 MAPRE1Q15691 268 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 ZNF77Q15935 545 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 KNOP1Q1ED39 458 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 FSTL4Q6MZW2 842 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 PKN3Q6P5Z2 889 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 C4orf50Q6ZRC1 276 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 HS2ST1Q7LGA3 356 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 SCN4BQ8IWT1 228 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 KIAA0895Q8NCT3 520 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 MYCBPAPQ8TBZ2 947 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 PAGE5Q96GU1 130 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 PCED1BQ96HM7 432 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 FNBP1Q96RU3 617 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 MMS19Q96T76 1030 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 HINFPQ9BQA5 517 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 MRPL45Q9BRJ2 306 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 FBRSL1Q9HCM7 1045 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 SCUBE2Q9NQ36 999 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 TMEM30AQ9NV96 361 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 DMAC2Q9NW81 257 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 DLL3Q9NYJ7 618 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 MAGEC2Q9UBF1 373 aaPredicted RBP7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 SERTAD1Q9UHV2 236 aa7.82□□□□□ -1.16
CACNA1A-222ENST00000636022 ZDHHC9Q9Y397 364 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms