RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 PIAS3Q9Y6X2 628 aa19.49■□□□□ 0.71
CLN6-210ENST00000635747 USP34Q70CQ2 3546 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 PDE6CP51160 858 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 KPNA1P52294 538 aaPredicted RBP19.48■□□□□ 0.71
CLN6-210ENST00000635747 DLG4P78352 724 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 MDH1BQ5I0G3 518 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 SV2AQ7L0J3 742 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 FAM186BQ8IYM0 893 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 B3GALNT2Q8NCR0 500 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 ENGASEQ8NFI3 743 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 C8orf48Q96LL4 319 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 IMPG2Q9BZV3 1241 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 ELOVL4Q9GZR5 314 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 TDP1Q9NUW8 608 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 MTF2Q9Y483 593 aaPredicted RBP19.48■□□□□ 0.71
CLN6-210ENST00000635747 NCANO14594 1321 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 ATP8B3O60423 1300 aa19.48■□□□□ 0.71
CLN6-210ENST00000635747 LRRN2O75325 713 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 AKAP3O75969 853 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 VNN1O95497 513 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 PRAMEF12O95522 483 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 TRIM21P19474 475 aaKnown RBP19.47■□□□□ 0.71
CLN6-210ENST00000635747 TARSP26639 723 aaKnown RBP19.47■□□□□ 0.71
CLN6-210ENST00000635747 PPP3CCP48454 512 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 PNOCQ13519 176 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 ZNF268Q14587 947 aaPredicted RBP19.47■□□□□ 0.71
CLN6-210ENST00000635747 CCDC142Q17RM4 750 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 COBLL1Q53SF7 1204 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 ZNF658Q5TYW1 1059 aaPredicted RBP19.47■□□□□ 0.71
CLN6-210ENST00000635747 TXNDC8Q6A555 127 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 DENND5BQ6ZUT9 1274 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 GPIHBP1Q8IV16 184 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 LRRC3BQ96PB8 259 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 IER2Q9BTL4 223 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 SEMA4AQ9H3S1 761 aa19.47■□□□□ 0.71
CLN6-210ENST00000635747 SPATA6Q9NWH7 488 aaPredicted RBP19.47■□□□□ 0.71
CLN6-210ENST00000635747 TRAV19A0A0A6YYK7 116 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 CETN3O15182 167 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 LAMTOR5O43504 91 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 PFKLP17858 780 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 PIK3CAP42336 1068 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 NOP14P78316 857 aaKnown RBP19.46■□□□□ 0.71
CLN6-210ENST00000635747 ZCWPW2Q504Y3 356 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 ZC3H14Q6PJT7 736 aaKnown RBP19.46■□□□□ 0.71
CLN6-210ENST00000635747 RALGPS2Q86X27 583 aaPredicted RBP19.46■□□□□ 0.71
CLN6-210ENST00000635747 ELOA2Q8IYF1 753 aaPredicted RBP19.46■□□□□ 0.71
CLN6-210ENST00000635747 SMARCE1Q969G3 411 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 SMYD3Q9H7B4 428 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 FBXO4Q9UKT5 387 aa19.46■□□□□ 0.71
CLN6-210ENST00000635747 CIZ1Q9ULV3 898 aaPredicted RBP19.46■□□□□ 0.71
CLN6-210ENST00000635747 NDRG2Q9UN36 371 aaKnown RBP19.46■□□□□ 0.71
CLN6-210ENST00000635747 SHISA7A6NL88 538 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 GFRA3O60609 400 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 ASS1P00966 412 aaKnown RBP19.45■□□□□ 0.7
CLN6-210ENST00000635747 HLA-DRAP01903 254 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 USP17L7P0C7H9 530 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 GTF2H1P32780 548 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 CDH8P55286 799 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 ZNF528Q3MIS6 628 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 CC2D1AQ6P1N0 951 aaPredicted RBP19.45■□□□□ 0.7
CLN6-210ENST00000635747 UNC93AQ86WB7 457 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 CCDC150Q8NCX0 1101 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 STKLD1Q8NE28 680 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 SPATA20Q8TB22 786 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 USP13Q92995 863 aaPredicted RBP19.45■□□□□ 0.7
CLN6-210ENST00000635747 NKD2Q969F2 451 aaPredicted RBP19.45■□□□□ 0.7
CLN6-210ENST00000635747 TSG101Q99816 390 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 TTLL2Q9BWV7 592 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 DNAI2Q9GZS0 605 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 DPEP3Q9H4B8 488 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 TRPM5Q9NZQ8 1165 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 NME7Q9Y5B8 376 aa19.45■□□□□ 0.7
CLN6-210ENST00000635747 F8VP50 259 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 STX10O60499 249 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 TADA3O75528 432 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 SP9P0CG40 484 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 EPB41P11171 864 aaKnown RBP19.44■□□□□ 0.7
CLN6-210ENST00000635747 CCNE1P24864 410 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 PRCPP42785 496 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 MCCD1P59942 119 aaPredicted RBP19.44■□□□□ 0.7
CLN6-210ENST00000635747 ITPRIPL2Q3MIP1 535 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 C1orf220Q5T0J3 134 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 SCARA5Q6ZMJ2 495 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 MAMSTRQ6ZN01 415 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 FRMD5Q7Z6J6 570 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 ZNF687Q8N1G0 1237 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 B3GNT5Q9BYG0 378 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 TRPC7Q9HCX4 862 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 GKN1Q9NS71 199 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 PCDHA5Q9Y5H7 936 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 MYO15AQ9UKN7 3530 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 F5P12259 2224 aa19.44■□□□□ 0.7
CLN6-210ENST00000635747 ZFHX2Q9C0A1 2572 aaPredicted RBP19.43■□□□□ 0.7
CLN6-210ENST00000635747 NUP210Q8TEM1 1887 aaPredicted RBP19.43■□□□□ 0.7
CLN6-210ENST00000635747 SPECC1L-ADORA2AF8WAN1 911 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 CKMP06732 381 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 PPP1R2P41236 205 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 AMPD2Q01433 879 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 FZD5Q13467 585 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 STIM1Q13586 685 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms