RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 CDH19Q9H159 772 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 G3BP2Q9UN86 482 aaKnown RBP8.24□□□□□ -1.09
LINC01108-202ENST00000635227 ATP6V1DQ9Y5K8 247 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 CYP46A1Q9Y6A2 500 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 FPGT-TNNI3KV9GXZ4 949 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 MYH15Q9Y2K3 1946 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 MAP3K15Q6ZN16 1313 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 CDHR2Q9BYE9 1310 aa8.24□□□□□ -1.09
LINC01108-202ENST00000635227 MAP4K4O95819 1239 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 APOBEC3AP31941 199 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 CUL4AQ13619 759 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 CCDC57Q2TAC2 916 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 ZNF529Q6P280 563 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 USP45Q70EL2 814 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 GGNQ86UU5 652 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 PRR18Q8N4B5 295 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 CLPTM1LQ96KA5 538 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 MRGPRX4Q96LA9 322 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 PLEKHG4BQ96PX9 1271 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 GTPBP4Q9BZE4 634 aaKnown RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 ZNF703Q9H7S9 590 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 SORCS3Q9UPU3 1222 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 SCN7AQ01118 1682 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 VCANP13611 3396 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
LINC01108-202ENST00000635227 MYH13Q9UKX3 1938 aa8.23□□□□□ -1.09
LINC01108-202ENST00000635227 MED23Q9ULK4 1368 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 DOCK2Q92608 1830 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 THSD7BQ9C0I4 1608 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 EYA2O00167 538 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 MATN3O15232 486 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 TEX33O43247 280 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 FAM20BO75063 409 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 MBD3O95983 291 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 A1BGP04217 495 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 VEGFAP15692 232 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 RFX5P48382 616 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 ZNF280AP59817 542 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 CTXN1P60606 82 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 SLC25A3Q00325 362 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 NHLH2Q02577 135 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 PUM1Q14671 1186 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 LRRC41Q15345 812 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 ZXDCQ2QGD7 858 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 KLHL40Q2TBA0 621 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 RABL3Q5HYI8 236 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 VPS53Q5VIR6 699 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 PPP4R3AQ6IN85 833 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 SEM1Q6ZVN7 128 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 PLXDC1Q8IUK5 500 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 TPH2Q8IWU9 490 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 DRC7Q8IY82 874 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 NSUN6Q8TEA1 469 aaKnown RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 SYAP1Q96A49 352 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 ISCA1Q9BUE6 129 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 FBXO34Q9NWN3 711 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 MYRFQ9Y2G1 1151 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 SNX14Q9Y5W7 946 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 CFAP20Q9Y6A4 193 aaKnown RBP8.22□□□□□ -1.09
LINC01108-202ENST00000635227 LTBP1Q14766 1721 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 SH3TC1Q8TE82 1336 aa8.22□□□□□ -1.09
LINC01108-202ENST00000635227 KIAA1551Q9HCM1 1747 aa8.21□□□□□ -1.09
LINC01108-202ENST00000635227 A0A1B0GUL6 1792 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 LRRC14BA6NHZ5 514 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 DRGXA6NNA5 263 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 ERVV-1B6SEH8 477 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 BAG4O95429 457 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 CASTP20810 708 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 MGAT1P26572 445 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 IL6STP40189 918 aaPredicted RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 PIP4K2AP48426 406 aaPredicted RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 CHN2P52757 468 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 TFCP2Q12800 502 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 FOXE3Q13461 319 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 CCDC158Q5M9N0 1113 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 GORABQ5T7V8 394 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 CACTINQ8WUQ7 758 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 ANP32BQ92688 251 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 ZNF503Q96F45 646 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 JAKMIP1Q96N16 626 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 NEU1Q99519 415 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 BOLA2Q9H3K6 86 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 EIF2B4Q9UI10 523 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 DDX49Q9Y6V7 483 aaKnown RBP8.21□□□□□ -1.1
LINC01108-202ENST00000635227 TCHHQ07283 1943 aa8.21□□□□□ -1.1
LINC01108-202ENST00000635227 TCRBV7S2A1N4TA0A589 114 aa8.2□□□□□ -1.1
LINC01108-202ENST00000635227 SCAF4O95104 1147 aaKnown RBP8.2□□□□□ -1.1
LINC01108-202ENST00000635227 AMHP03971 560 aa8.2□□□□□ -1.1
LINC01108-202ENST00000635227 ZFYP08048 801 aaPredicted RBP8.2□□□□□ -1.1
LINC01108-202ENST00000635227 HMGB1P09429 215 aaKnown RBP8.2□□□□□ -1.1
LINC01108-202ENST00000635227 VCAM1P19320 739 aa8.2□□□□□ -1.1
LINC01108-202ENST00000635227 AKAP5P24588 427 aa8.2□□□□□ -1.1
LINC01108-202ENST00000635227 PLA2G5P39877 138 aa8.2□□□□□ -1.1
LINC01108-202ENST00000635227 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
LINC01108-202ENST00000635227 UBXN2BQ14CS0 331 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms