RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF48Q96MX3 618 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 MPHOSPH6Q99547 160 aaKnown RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 FDXACB1Q9BRP7 624 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 GTPBP4Q9BZE4 634 aaKnown RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 KCTD10Q9H3F6 313 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 RNF181Q9P0P0 153 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 DDX20Q9UHI6 824 aaKnown RBP3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 PRSS50Q9UI38 385 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 HDAC5Q9UQL6 1122 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 LRP12Q9Y561 859 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 FPGT-TNNI3KV9GXZ4 949 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 MYPNQ86TC9 1320 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 KDRP35968 1356 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 KIF24Q5T7B8 1368 aa3.08□□□□□ -1.92
SMARCB1-208ENST00000634926 BRCA2P51587 3418 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 NRXN2Q9P2S2 1712 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 VIRMAQ69YN4 1812 aaKnown RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 MANSC4A6NHS7 340 aaPredicted RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 PRR5-ARHGAP8B1AHC4 643 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 APOL3O95236 402 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 LY86O95711 162 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 ZBED1O96006 694 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 LDHAP00338 332 aaKnown RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 CFIP05156 583 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 IFIT2P09913 472 aaKnown RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 PDCP20941 246 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 FDXRP22570 491 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 CCKBRP32239 447 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 WASP42768 502 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 HTR3AP46098 478 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 GPR15P49685 360 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC16A1P53985 500 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 LGALS4P56470 323 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 BCAR1P56945 870 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 KIF23Q02241 960 aaPredicted RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 MORC3Q14149 939 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 COBLL1Q53SF7 1204 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 CCDC178Q5BJE1 867 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 RUSC1-AS1Q66K80 236 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 DRICH1Q6PGQ1 229 aaPredicted RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 TOM1L2Q6ZVM7 507 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 CATIPQ7Z7H3 387 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 OR14C36Q8NHC7 312 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 TSPEARQ8WU66 669 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 RPGRQ92834 1020 aaKnown RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 C1GALT1C1Q96EU7 318 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 MVB12AQ96EY5 273 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC2A13Q96QE2 648 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 MAP3K14Q99558 947 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 ACO2Q99798 780 aaKnown RBP3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 SYT17Q9BSW7 474 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 ADGRE3Q9BY15 652 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 ALOXE3Q9BYJ1 711 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 PRDM12Q9H4Q4 367 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 FAM204AQ9H8W3 233 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 IFT122Q9HBG6 1241 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 MTMR4Q9NYA4 1195 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 SERPINB13Q9UIV8 391 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 DNM3Q9UQ16 869 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 MRC1P22897 1456 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 UBR2Q8IWV8 1755 aa3.07□□□□□ -1.92
SMARCB1-208ENST00000634926 PXDNLA1KZ92 1463 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 DIRC3C9JPN6 131 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 H3BML4 177 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 APAF1O14727 1248 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 TPP1O14773 563 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 NRP1O14786 923 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 DTNBO60941 627 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 CDKL5O76039 1030 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 FSBPO95073 299 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 NTN1O95631 604 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 INSRP06213 1382 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 IL2RBP14784 551 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 RHCEP18577 417 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 ITPKBP27987 946 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 NEK3P51956 506 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 WNT3AP56704 352 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 ZNF280AP59817 542 aaPredicted RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 SSBP2P81877 361 aaPredicted RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 SCN7AQ01118 1682 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 RHDQ02161 417 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 MALLQ13021 153 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 ADRM1Q16186 407 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 PGS1Q32NB8 556 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 UAP1L1Q3KQV9 507 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 MAP3K19Q56UN5 1328 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 IL31Q6EBC2 164 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 TSHZ1Q6ZSZ6 1077 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 C10orf71Q711Q0 1435 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 MYH14Q7Z406 1995 aaKnown RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 GRAMD1CQ8IYS0 662 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 PPM1NQ8N819 430 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 FATE1Q969F0 183 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 WDR90Q96KV7 1748 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 STRBPQ96SI9 672 aaKnown RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 NOL10Q9BSC4 688 aaKnown RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 ACE2Q9BYF1 805 aaPredicted RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 NSD3Q9BZ95 1437 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 TMEM60Q9H2L4 133 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 CNTNAP2Q9UHC6 1331 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms