RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 LRCH4O75427 683 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 UBOX5O94941 541 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ARIH2O95376 493 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 IFNB1P01574 187 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 P4HA1P13674 534 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 TSHRP16473 764 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 KRT15P19012 456 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 TAC1P20366 129 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 GCAP28676 217 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 RFC1P35251 1148 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 PHKA2P46019 1235 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 RAD23BP54727 409 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ELF3P78545 371 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 OTUD4Q01804 1114 aaKnown RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 CCDC15Q0P6D6 951 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 SF3A3Q12874 501 aaKnown RBP eCLIP8.47□□□□□ -1.052e-9■■■■■ 30.3
GPC3-204ENST00000631057 PDIA2Q13087 525 aaKnown RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 ACVR2BQ13705 512 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 PWP2Q15269 919 aaKnown RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 ZKSCAN8Q15776 578 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 KYAT1Q16773 422 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 WDR72Q3MJ13 1102 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 GALNTL6Q49A17 601 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 FAM133BQ5BKY9 247 aaKnown RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 TMEM63BQ5T3F8 832 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 RGS9BPQ6ZS82 235 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 EEPD1Q7L9B9 569 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 CCDC91Q7Z6B0 441 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 PRRT2Q7Z6L0 340 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 DHX37Q8IY37 1157 aaKnown RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 ZBED8Q8IZ13 594 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ATP11CQ8NB49 1132 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ACTL9Q8TC94 416 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 RSAD2Q8WXG1 361 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ACSF2Q96CM8 615 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 HAUS1Q96CS2 278 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 NLRP4Q96MN2 994 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 SPATA33Q96N06 139 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 TMEM121Q9BTD3 319 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 NFKBIZQ9BYH8 718 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 CDT1Q9H211 546 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ECT2Q9H8V3 914 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 ZWILCHQ9H900 591 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 RXFP1Q9HBX9 757 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 SSU72Q9NP77 194 aaKnown RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 KLHL14Q9P2G3 628 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 A0A1B0GUA9 196 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 FOXO6A8MYZ6 492 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 MCF2LO15068 1137 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 PEX10O60683 326 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 CNMDO75829 334 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 RNF8O76064 485 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 ASMTLO95671 621 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 KRT19P08727 400 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 CXCL8P10145 99 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 MCF2P10911 925 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 KDELR1P24390 212 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 ATICP31939 592 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 FOXN2P32314 431 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 IREB2P48200 963 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 HIRAP54198 1017 aaPredicted RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 GEMIN4P57678 1058 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 OSTNP61366 133 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 NCALDP61601 193 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 MBTD1Q05BQ5 628 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 PTPN11Q06124 597 aaPredicted RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 MYO1EQ12965 1108 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 BNIP1Q12981 228 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 RIPK1Q13546 671 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 FASTKD3Q14CZ7 662 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 FAM187BQ17R55 369 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 EFHC2Q5JST6 749 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 WDR78Q5VTH9 848 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 EEF1DP3Q658K8 133 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 EFCAB12Q6NXP0 572 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 XYLT1Q86Y38 959 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 TTC39CQ8N584 583 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 JOSD2Q8TAC2 188 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 DENND1AQ8TEH3 1009 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 FGD4Q96M96 766 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 PHOX2BQ99453 314 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 TACO1Q9BSH4 297 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 PITPNM3Q9BZ71 974 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 MIS12Q9H081 205 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 ASCC2Q9H1I8 757 aaPredicted RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 FAM124BQ9H5Z6 455 aaPredicted RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 METTL5Q9NRN9 209 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 ASNSD1Q9NWL6 643 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 SIX4Q9UIU6 781 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 STARD13Q9Y3M8 1113 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 SCN1AP35498 2009 aa8.46□□□□□ -1.06
GPC3-204ENST00000631057 PDCD11Q14690 1871 aaKnown RBP8.46□□□□□ -1.06
GPC3-204ENST00000631057 E7ESA3 106 aa8.45□□□□□ -1.06
GPC3-204ENST00000631057 APOC4-APOC2K7ER74 178 aa8.45□□□□□ -1.06
GPC3-204ENST00000631057 CXCL11O14625 94 aa8.45□□□□□ -1.06
GPC3-204ENST00000631057 B4GALT5O43286 388 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms