RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ATF6	P18850	670 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	VEPH1	Q14D04	833 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	LEXM	Q3ZCV2	418 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	ATAT1	Q5SQI0	421 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	FEZF2	Q8TBJ5	459 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	TFAP2B	Q92481	460 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	ZNF512	Q96ME7	567 aa	Predicted RBP	27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	KRT82	Q9NSB4	513 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	ASB3	Q9Y575	518 aa		27.59	■■■□□ 2.01
UBE3A-222	ENST00000630907	CALCA	P01258	141 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	FAM200B	P0CF97	657 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	BRD2	P25440	801 aa	Known RBP	27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	ANXA13	P27216	316 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	GNA15	P30679	374 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	CACNA2D1	P54289	1103 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	JAM2	P57087	298 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	SMAD4	Q13485	552 aa	Known RBP	27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	SDHAF4	Q5VUM1	108 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	GIPC2	Q8TF65	315 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	C8orf48	Q96LL4	319 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	NUP58	Q9BVL2	599 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907	THEG	Q9P2T0	379 aa		27.58	■■■□□ 2.01
UBE3A-222	ENST00000630907		F8VP50	259 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907		O00370	1275 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	AP5Z1	O43299	807 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	STAT1	P42224	750 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	BPIFB4	P59827	614 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	PTK2	Q05397	1052 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	STIL	Q15468	1287 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	CNGA2	Q16280	664 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	GOLGA7B	Q2TAP0	167 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	ITIH5	Q86UX2	942 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	GPR152	Q8TDT2	470 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	RIPOR3	Q96MK2	946 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	SMO	Q99835	787 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	ZSWIM1	Q9BR11	485 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	DUSP16	Q9BY84	665 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	TRIM5	Q9C035	493 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	DMAP1	Q9NPF5	467 aa	Predicted RBP	27.57	■■■□□ 2
UBE3A-222	ENST00000630907	ACP6	Q9NPH0	428 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	TMEM30A	Q9NV96	361 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	TSPAN16	Q9UKR8	245 aa		27.57	■■■□□ 2
UBE3A-222	ENST00000630907	PTPN2	P17706	415 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	CLCN1	P35523	988 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	SOX5	P35711	763 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	MTHFR	P42898	656 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	TFF2	Q03403	129 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	LCLAT1	Q6UWP7	414 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	27.56	■■■□□ 2
UBE3A-222	ENST00000630907	ANKRD52	Q8NB46	1076 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	27.56	■■■□□ 2
UBE3A-222	ENST00000630907	SPATA17	Q96L03	361 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	CEP295NL	Q96MC4	621 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	KCNK16	Q96T55	309 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	EDEM3	Q9BZQ6	932 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	CSNK1G1	Q9HCP0	422 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	HESX1	Q9UBX0	185 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	CDH22	Q9UJ99	828 aa		27.56	■■■□□ 2
UBE3A-222	ENST00000630907	USP15	Q9Y4E8	981 aa	Predicted RBP	27.56	■■■□□ 2
UBE3A-222	ENST00000630907	GRXCR2	A6NFK2	248 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	THAP12	O43422	761 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	MBTPS2	O43462	519 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	MED7	O43513	233 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	NPR3	P17342	541 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	MAP3K7CL	P57077	242 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	TAF12	Q16514	161 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	FIGN	Q5HY92	759 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	CLEC20A	Q6ZU45	233 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.55	■■■□□ 2
UBE3A-222	ENST00000630907	PSMG2	Q969U7	264 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	IQCD	Q96DY2	449 aa		27.55	■■■□□ 2
UBE3A-222	ENST00000630907	DNMT3B	Q9UBC3	853 aa	Known RBP	27.55	■■■□□ 2
UBE3A-222	ENST00000630907	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	27.55	■■■□□ 2
UBE3A-222	ENST00000630907	SLC38A8	A6NNN8	435 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	BEST1	O76090	585 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	GFPT2	O94808	682 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	CSH1	P0DML2	217 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	CSH2	P0DML3	217 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	PTPRD	P23468	1912 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	PUS10	Q3MIT2	529 aa	Known RBP	27.54	■■■□□ 2
UBE3A-222	ENST00000630907	ITIH6	Q6UXX5	1313 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	SLC47A2	Q86VL8	602 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	TTC30A	Q86WT1	665 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	ZMIZ2	Q8NF64	920 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	ZNF606	Q8WXB4	792 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	SUSD6	Q92537	303 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	NECTIN4	Q96NY8	510 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	CORO1B	Q9BR76	489 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	TTYH3	Q9C0H2	523 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	HCFC1R1	Q9NWW0	138 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	MYO6	Q9UM54	1294 aa		27.54	■■■□□ 2
UBE3A-222	ENST00000630907	MICAL2	O94851	1124 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	BCAT1	P54687	386 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	SLC8A3	P57103	927 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	AAK1	Q2M2I8	961 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	UBA3	Q8TBC4	463 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	BAP1	Q92560	729 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	27.53	■■■□□ 2	6e-6	■■□□□ 13.3
UBE3A-222	ENST00000630907	REV3L	O60673	3130 aa		27.53	■■■□□ 2
UBE3A-222	ENST00000630907	NTHL1	P78549	312 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms