RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CAB39Q9Y376 341 aaPredicted RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 MBD5Q9P267 1494 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 LRRC7Q96NW7 1537 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 RHOBTB3O94955 611 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 URODP06132 367 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 MAP3K7CLP57077 242 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 DNAL1Q4LDG9 190 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 AGAP9Q5VTM2 703 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 DDI1Q8WTU0 396 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 FAM47E-STBD1D6RA91 191 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 GOLGA8TH3BQL2 631 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 PCNAP12004 261 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 FMR1Q06787 632 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 DEFB128Q7Z7B8 93 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 NT5DC4Q86YG4 428 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 ANKRD49Q8WVL7 239 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 RIT2Q99578 217 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 MTMR12Q9C0I1 747 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 RUVBL2Q9Y230 463 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 CDY2AQ9Y6F7 541 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 RASA1P20936 1047 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 C4orf22Q6V702 233 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 ACOT1Q86TX2 421 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 THUMPD3Q9BV44 507 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 OSGEPL1Q9H4B0 414 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 BLOC1S6Q9UL45 172 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 RPA1P27694 616 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 ITGA8P53708 1063 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 RUNX1T1Q06455 604 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 TRIP4Q15650 581 aaPredicted RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 UNC45BQ8IWX7 931 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 WDR24Q96S15 920 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 SHCBP1LQ9BZQ2 653 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 COPG1Q9Y678 874 aaKnown RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 EGFRP00533 1210 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 CKBP12277 381 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 EPHB3P54753 998 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 ACAD10Q6JQN1 1059 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 FAM136AQ96C01 138 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 IMPAD1Q9NX62 359 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 MAP3K6O95382 1288 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 RBP3P10745 1247 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 MUTP22033 750 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 GRK3P35626 688 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 KCNJ1P48048 391 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 CTCFP49711 727 aaPredicted RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 PGS1Q32NB8 556 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 EPN3Q9H201 632 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
SHPRH-211ENST00000629427 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 PPIL6Q8IXY8 311 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 MPP6Q9NZW5 540 aa12.19□□□□□ -0.46
SHPRH-211ENST00000629427 THP07101 528 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 PSMA3P25788 255 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 STK4Q13043 487 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 BFSP2Q13515 415 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 PLEKHH3Q7Z736 793 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ADGRF2Q8IZF7 708 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 PCDHB12Q9Y5F1 795 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 STRNO43815 780 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 SPAG6O75602 509 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 PCDH8O95206 1070 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CLK1P49759 484 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CUL2Q13617 745 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ADSSL1Q8N142 457 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CNDP1Q96KN2 507 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CIPCQ9C0C6 399 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 EIF3LQ9Y262 564 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ICAM1P05362 532 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 TRIM28Q13263 835 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 FGD2Q7Z6J4 655 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 P3H2Q8IVL5 708 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 MIER2Q8N344 545 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 KLF6Q99612 283 aaPredicted RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CELF4Q9BZC1 486 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 LZTS1Q9Y250 596 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 AAR2Q9Y312 384 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF284Q2VY69 593 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 FAXCQ5TGI0 409 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 TIGD7Q6NT04 549 aaPredicted RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 SH2D3CQ8N5H7 860 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 DPF2Q92785 391 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 SSU72P8A0A1W2PR75 194 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms