RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PTPN1P18031 435 aaKnown RBP11.84□□□□□ -0.51
DDX41-219ENST00000629036 ALDH1A3P47895 512 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 FMO5P49326 533 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 NDST1P52848 882 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 EPHB3P54753 998 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 USP46P62068 366 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 ORC1Q13415 861 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 TEAD2Q15562 447 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 DDR2Q16832 855 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
DDX41-219ENST00000629036 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
DDX41-219ENST00000629036 FUKQ8N0W3 1084 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 CRYBG2Q8N1P7 616 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 SLC44A3Q8N4M1 653 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 MLKLQ8NB16 471 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 LEMD2Q8NC56 503 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 ZMIZ2Q8NF64 920 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 OR6B3Q8NGW1 331 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 GIPC2Q8TF65 315 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 TATDN2Q93075 761 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 TRMT2BQ96GJ1 504 aaKnown RBP11.84□□□□□ -0.51
DDX41-219ENST00000629036 FAXDC2Q96IV6 333 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 ASB16Q96NS5 453 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 PLA2G2FQ9BZM2 168 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 ELOVL4Q9GZR5 314 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 TRPV4Q9HBA0 871 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 KMT2BQ9UMN6 2715 aaPredicted RBP11.83□□□□□ -0.52
DDX41-219ENST00000629036 A0A1W2PRU2 124 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 SHISA7A6NL88 538 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 CLDN5O00501 218 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 MYL4P12829 197 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 BDNFP23560 247 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 NLRP12P59046 1061 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 TDGQ13569 410 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 VSTM1Q6UX27 236 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 FAM35AQ86V20 835 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 UNC93AQ86WB7 457 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 RIN3Q8TB24 985 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 NKD2Q969F2 451 aaPredicted RBP11.83□□□□□ -0.52
DDX41-219ENST00000629036 NXPE3Q969Y0 559 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 MCRS1Q96EZ8 462 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 SPATA17Q96L03 361 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 ZNF512Q96ME7 567 aaPredicted RBP11.83□□□□□ -0.52
DDX41-219ENST00000629036 LRRC3BQ96PB8 259 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 TTLL2Q9BWV7 592 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 SRRTQ9BXP5 876 aaKnown RBP11.83□□□□□ -0.52
DDX41-219ENST00000629036 SNX25Q9H3E2 840 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 CYP3A43Q9HB55 503 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 METTL14Q9HCE5 456 aaKnown RBP11.83□□□□□ -0.52
DDX41-219ENST00000629036 EPG5Q9HCE0 2579 aa11.83□□□□□ -0.52
DDX41-219ENST00000629036 FANCMQ8IYD8 2048 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 CACNA1IQ9P0X4 2223 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 SLC38A8A6NNN8 435 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 A8MXQ7 604 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 F8VP50 259 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 ARNTLO00327 626 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 ZNF197O14709 1029 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 TNFRSF10BO14763 440 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 STX10O60499 249 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 PRAMEF12O95522 483 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 CCDC130P13994 396 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 GABRR2P28476 465 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 WEE1P30291 646 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 NBL1P41271 181 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 CYP4F8P98187 520 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 MAPRE1Q15691 268 aaKnown RBP11.82□□□□□ -0.52
DDX41-219ENST00000629036 TANGO2Q6ICL3 276 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 IQCEQ6IPM2 695 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 DPY19L2P1Q6NXN4 242 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 C4orf50Q6ZRC1 276 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 ACOT1Q86TX2 421 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 SPATA2LQ8IUW3 424 aaPredicted RBP11.82□□□□□ -0.52
DDX41-219ENST00000629036 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 ELMOD1Q8N336 334 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
DDX41-219ENST00000629036 C8orf48Q96LL4 319 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 CEP295NLQ96MC4 621 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 KXD1Q9BQD3 176 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 CSNK1G1Q9HCP0 422 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 SLC2A4RGQ9NR83 387 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 IL37Q9NZH6 218 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
DDX41-219ENST00000629036 R3HCC1Q9Y3T6 440 aaKnown RBP11.82□□□□□ -0.52
DDX41-219ENST00000629036 DNAH14Q0VDD8 3507 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 FAM92AA1XBS5 289 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 KRBA1A5PL33 1030 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 ECI2O75521 394 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 BEST1O76090 585 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 CSH1P0DML2 217 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 CSH2P0DML3 217 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 SRFP11831 508 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 P4HA1P13674 534 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
DDX41-219ENST00000629036 ERCC5P28715 1186 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms