RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NCALDP61601 193 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 TAGAPQ8N103 731 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 NAT9Q9BTE0 207 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 PLA2G12BQ9BX93 195 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 LMTK2Q8IWU2 1503 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 MYO1GB0I1T2 1018 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 AKR1B1P15121 316 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 DRG2P55039 364 aaKnown RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 C9orf16Q9BUW7 83 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 RNPEPQ9H4A4 650 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
VCL-206ENST00000623461 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 VTI1BQ9UEU0 232 aa9.25□□□□□ -0.93
VCL-206ENST00000623461 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 E5RI56 91 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ADCY6O43306 1168 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 CAPN1P07384 714 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 SGSM1Q2NKQ1 1148 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 C17orf50Q8WW18 174 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 S100ZQ8WXG8 99 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 PTPRN2Q92932 1015 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 BORCS5Q969J3 196 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 MRPL4Q9BYD3 311 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ARHGEF38Q9NXL2 777 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 FAM32AQ9Y421 112 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 TMEM191CA6NGB0 347 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 FAM25AB3EWG3 89 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 FAM25CB3EWG5 89 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 FAM25GB3EWG6 89 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ABL1P00519 1130 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 RALBP11234 206 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 OSTNP61366 133 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 MTERF3Q96E29 417 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 DCUN1D5Q9BTE7 237 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TRIM62Q9BVG3 475 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 NOL6Q9H6R4 1146 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 FANCEQ9HB96 536 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 METP08581 1390 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ABCA6Q8N139 1617 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 VAV1P15498 845 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 CDH3P22223 829 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 JAK1P23458 1154 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ALDH1A3P47895 512 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 RAB15P59190 212 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 AMPD2Q01433 879 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TSTA3Q13630 321 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 TFDP3Q5H9I0 405 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ST13P5Q8NFI4 369 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 OSCP1Q8WVF1 389 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 OTUB1Q96FW1 271 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 ISCA1Q9BUE6 129 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TUBGCP4Q9UGJ1 667 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 MAP3K13O43283 966 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TPD52L2O43399 206 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 TBC1D12O60347 775 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 PDE9AO76083 593 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 CCDC166P0CW27 439 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 RBM44Q6ZP01 1051 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 BEST2Q8NFU1 509 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 SHCBP1LQ9BZQ2 653 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 C6orf203Q9P0P8 240 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 PCDHGB4Q9UN71 923 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TAF4O00268 1085 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 SLC4A1P02730 911 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ME2P23368 584 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TP53BP2Q13625 1128 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 SNRNP35Q16560 246 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 DHDDSQ86SQ9 333 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 BBS7Q8IWZ6 715 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 RTKN2Q8IZC4 609 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 MARCH10Q8NA82 808 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 TSPAN14Q8NG11 270 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 PDCD6IPQ8WUM4 868 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 ITFG2Q969R8 447 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 EPAS1Q99814 870 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ATMINO43313 823 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 MGRN1O60291 552 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 ITGA4P13612 1032 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 FAM71DQ8N9W8 422 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TCP10LQ8TDR4 215 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
VCL-206ENST00000623461 PCDH9Q9HC56 1237 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 CYLDQ9NQC7 956 aa9.24□□□□□ -0.93
VCL-206ENST00000623461 TCP10L2B9ZVM9 353 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CLOCKO15516 846 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TIMM44O43615 452 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 MFN2O95140 757 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TFE3P19532 575 aaPredicted RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 RAD23AP54725 363 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ITGADQ13349 1161 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TOP3AQ13472 1001 aaPredicted RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 SCARF1Q14162 830 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TJAP1Q5JTD0 557 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TBCELQ5QJ74 424 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms