RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 F8VP50 259 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 PPFIA2O75334 1257 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 RPL34P49207 117 aaKnown RBP17.2■□□□□ 0.34
LDB3-208ENST00000623007 LILRA4P59901 499 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 ZNF252P-AS1Q0IIN9 211 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 TERF2Q15554 542 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 PPP1R26Q5T8A7 1209 aaPredicted RBP17.2■□□□□ 0.34
LDB3-208ENST00000623007 AADACL2Q6P093 401 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 LLGL2Q6P1M3 1020 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 ZNF365Q70YC5 407 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 ADGRF2Q8IZF7 708 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 RAET1EQ8TD07 263 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 UROC1Q96N76 676 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
LDB3-208ENST00000623007 CYTH4Q9UIA0 394 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 H3BQF6 201 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 RNF40O75150 1001 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 SYF2O95926 243 aaKnown RBP17.19■□□□□ 0.34
LDB3-208ENST00000623007 CHRNA1P02708 482 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 THPOP40225 353 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 SLC6A3Q01959 620 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 BOLA3Q53S33 107 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 OR6B2Q6IFH4 312 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 TTC27Q6P3X3 843 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 TMC3Q7Z5M5 1100 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 SLAIN1Q8ND83 568 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 SNF8Q96H20 258 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 GDAP1L1Q96MZ0 367 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 TRIM51Q9BSJ1 452 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 DPH5Q9H2P9 285 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 RSAD1Q9HA92 442 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 KLK14Q9P0G3 267 aa17.19■□□□□ 0.34
LDB3-208ENST00000623007 ZNF487B1APH4 448 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 LRCH4O75427 683 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 FAM153BP0C7A2 387 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 OGDHQ02218 1023 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 SLC25A11Q02978 314 aaKnown RBP17.18■□□□□ 0.34
LDB3-208ENST00000623007 ITGA7Q13683 1181 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 PDK2Q15119 407 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 FAM153CQ494X1 144 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 TEKT4Q8WW24 435 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 ART4Q93070 314 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 PRDM16Q9HAZ2 1276 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 ZDHHC18Q9NUE0 388 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 RNF186Q9NXI6 227 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 VPS18Q9P253 973 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 SCN1AP35498 2009 aa17.18■□□□□ 0.34
LDB3-208ENST00000623007 CEP350Q5VT06 3117 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 hCG_1818297A0A087WSY0 165 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 A0A0U1RQF3 1178 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 LRRD1A4D1F6 860 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 C2CD4BA6NLJ0 364 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 E5RJQ4 531 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 AGPSO00116 658 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 SMAPO00193 183 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 PTGESO14684 152 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 POLR3GO15318 223 aaPredicted RBP17.17■□□□□ 0.34
LDB3-208ENST00000623007 CCND3P30281 292 aaPredicted RBP17.17■□□□□ 0.34
LDB3-208ENST00000623007 SDC4P31431 198 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 CDKN2BP42772 138 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 KRT17Q04695 432 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 TAZQ16635 292 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 EFHC1Q5JVL4 640 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 CPNE8Q86YQ8 564 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 ZDHHC14Q8IZN3 488 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 CMASQ8NFW8 434 aaPredicted RBP17.17■□□□□ 0.34
LDB3-208ENST00000623007 UBA3Q8TBC4 463 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 KBTBD7Q8WVZ9 684 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 HNRNPABQ99729 332 aaKnown RBP17.17■□□□□ 0.34
LDB3-208ENST00000623007 HINFPQ9BQA5 517 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 DSEQ9UL01 958 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 USP18Q9UMW8 372 aa17.17■□□□□ 0.34
LDB3-208ENST00000623007 GOLGA6CA6NDK9 693 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 HMGB1P1B2RPK0 211 aaPredicted RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 CYB561D2O14569 222 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 GABRDO14764 452 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 XPO1O14980 1071 aaKnown RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 ITGAVP06756 1048 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PFKMP08237 780 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 GOLGA6DP0CG33 693 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 ATF2P15336 505 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PDGFRAP16234 1089 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 ACLYP53396 1101 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 DHX9Q08211 1270 aaKnown RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 ORC1Q13415 861 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 TFDP2Q14188 446 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 SLC26A9Q7LBE3 791 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 TSEN2Q8NCE0 465 aaKnown RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 B3GALNT2Q8NCR0 500 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 ARRDC4Q8NCT1 418 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 C1orf54Q8WWF1 131 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 NKD2Q969F2 451 aaPredicted RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 CCDC114Q96M63 670 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms