RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 PSMC1P62191 440 aaKnown RBP11.76□□□□□ -0.53
LINC00963-214ENST00000622680 CREB5Q02930 508 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 PSAPL1Q6NUJ1 521 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 SYT13Q7L8C5 426 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 SCN4BQ8IWT1 228 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 ADGRF2Q8IZF7 708 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 CAMKK1Q8N5S9 505 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 ARL14EPQ8N8R7 260 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-214ENST00000622680 CXorf38Q8TB03 319 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 CD101Q93033 1021 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 HVCN1Q96D96 273 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 TRMT2BQ96GJ1 504 aaKnown RBP11.76□□□□□ -0.53
LINC00963-214ENST00000622680 STRA6Q9BX79 667 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 MTMR12Q9C0I1 747 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 TMEM206Q9H813 350 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 PDE11AQ9HCR9 933 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-214ENST00000622680 UXTQ9UBK9 157 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-214ENST00000622680 SIX4Q9UIU6 781 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 SMC3Q9UQE7 1217 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 PCDHGA5Q9Y5G8 931 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 SNX9Q9Y5X1 595 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 PTPRJQ12913 1337 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 NYNRINQ9P2P1 1898 aaKnown RBP11.76□□□□□ -0.53
LINC00963-214ENST00000622680 PLXNB3Q9ULL4 1909 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 LNP1A1A4G5 178 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 VPS37CA5D8V6 355 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 SCAMP3O14828 347 aaKnown RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 GIPC1O14908 333 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 ATP2C2O75185 946 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 GCNT3O95395 438 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 USP17L7P0C7H9 530 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 DGKEP52429 567 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 RPL10AP62906 217 aaKnown RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 AMPD2Q01433 879 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 MYL7Q01449 175 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 ELF2Q15723 593 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 L1TD1Q5T7N2 865 aaKnown RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 BRAPQ7Z569 592 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 NT5DC4Q86YG4 428 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 CSGALNACT2Q8N6G5 542 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 SH3RF2Q8TEC5 729 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 ATP2A3Q93084 1043 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 MYLPFQ96A32 169 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 ACDQ96AP0 544 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 DNAJC19Q96DA6 116 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 MYRFLQ96LU7 910 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 ACBD6Q9BR61 282 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 CBWD1Q9BRT8 395 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 LSM14BQ9BX40 385 aaKnown RBP11.75□□□□□ -0.53
LINC00963-214ENST00000622680 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 PCIF1Q9H4Z3 704 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 VPS45Q9NRW7 570 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 GCNT4Q9P109 453 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 CKAP5Q14008 2032 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 KNL1Q8NG31 2342 aa11.75□□□□□ -0.53
LINC00963-214ENST00000622680 NUMA1Q14980 2115 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 FASNP49327 2511 aaKnown RBP11.74□□□□□ -0.53
LINC00963-214ENST00000622680 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 PATE3B3GLJ2 98 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 BMP15O95972 392 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 BCKDHBP21953 392 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 OPRD1P41143 372 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 NOVA1P51513 510 aaKnown RBP11.74□□□□□ -0.53
LINC00963-214ENST00000622680 USP46P62068 366 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 SHC2P98077 582 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 ZXDBP98169 803 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 POU5F1Q01860 360 aaKnown RBP11.74□□□□□ -0.53
LINC00963-214ENST00000622680 KCNB1Q14721 858 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 POSTNQ15063 836 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 SOWAHAQ2M3V2 549 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 CFAP221Q4G0U5 840 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 SFTPA1Q8IWL2 248 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 TMEM86AQ8N2M4 240 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 LRRC52Q8N7C0 313 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 TSTD1Q8NFU3 115 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 ACCSQ96QU6 501 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 CRTAC1Q9NQ79 661 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 SEL1LQ9UBV2 794 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 FBXO2Q9UK22 296 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-214ENST00000622680 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 EXOC7Q9UPT5 735 aa11.74□□□□□ -0.53
LINC00963-214ENST00000622680 A0A087X0B3 334 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 BCLAF3A2AJT9 711 aaKnown RBP11.73□□□□□ -0.53
LINC00963-214ENST00000622680 SOBPA7XYQ1 873 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 GABRDO14764 452 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 PRPF6O94906 941 aaKnown RBP11.73□□□□□ -0.53
LINC00963-214ENST00000622680 CAVIN2O95810 425 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 TMEM191BP0C7N4 346 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms