RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 INF2Q27J81 1249 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 TMEM266Q2M3C6 531 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 ARHGAP15Q53QZ3 475 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 ZBTB37Q5TC79 503 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 ANGEL2Q5VTE6 544 aaKnown RBP6.89□□□□□ -1.31
DDX1-208ENST00000621973 R3HCC1LQ7Z5L2 792 aaKnown RBP6.89□□□□□ -1.31
DDX1-208ENST00000621973 CXorf67Q86X51 503 aaPredicted RBP6.89□□□□□ -1.31
DDX1-208ENST00000621973 COG8Q96MW5 612 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 TMEM237Q96Q45 408 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 BPIFA3Q9BQP9 254 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 ITPAQ9BY32 194 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 RMI1Q9H9A7 625 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 LY9Q9HBG7 655 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 HPF1Q9NWY4 346 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 CLIP2Q9UDT6 1046 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 FHOD1Q9Y613 1164 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 RREB1Q92766 1687 aa6.89□□□□□ -1.31
DDX1-208ENST00000621973 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 HMX3A6NHT5 357 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ELOA3DA6NLF2 546 aaPredicted RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 BECN2A8MW95 431 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NT5C1B-RDH14C9J2C7 533 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 FANCGO15287 622 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 PHGDHO43175 533 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 ZBTB43O43298 467 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 DGAT1O75907 488 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NDST3O95803 873 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 GNAT2P19087 354 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ABCD3P28288 659 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ATP5DP30049 168 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CRKLP46109 303 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 MANFP55145 182 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 JAM2P57087 298 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 YBEYP58557 167 aaPredicted RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 RBM6P78332 1123 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 CREB5Q02930 508 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CHRNDQ07001 517 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 SLC12A1Q13621 1099 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ZNF174Q15697 407 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CCDC152Q4G0S7 254 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CCDC157Q569K6 752 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 KRT40Q6A162 431 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CCDC62Q6P9F0 684 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 UBE3DQ7Z6J8 389 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 TBC1D21Q8IYX1 336 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 GSDMBQ8TAX9 411 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 SPATA18Q8TC71 538 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 TSPEARQ8WU66 669 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 AFG1LQ8WV93 481 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ZNF606Q8WXB4 792 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 KLHDC7BQ96G42 594 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 TEX13BQ9BXU2 312 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NAT10Q9H0A0 1025 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ZNF281Q9Y2X9 895 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 PIAS3Q9Y6X2 628 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NEDD4P46934 1319 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 PNPLA7Q6ZV29 1317 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NID2Q14112 1375 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 AHDC1Q5TGY3 1603 aaPredicted RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 MYO5AQ9Y4I1 1855 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 FAM237AA0A1B0GTK4 181 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 PODXLO00592 558 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CAPN9O14815 690 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NEMFO60524 1076 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 PPP6R2O75170 966 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 SLC22A3O75751 556 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 BEST1O76090 585 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ENDOD1O94919 500 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ZNF202O95125 648 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NTSR2O95665 410 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 APBB3O95704 486 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 SLFN14P0C7P3 912 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 U2AF2P26368 475 aaKnown RBP eCLIP6.88□□□□□ -1.319e-8■■■■□ 21.1
DDX1-208ENST00000621973 SLC7A1P30825 629 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 IGHMBP2P38935 993 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 CSE1LP55060 971 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 NLRP12P59046 1061 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 DSC2Q02487 901 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 EFR3AQ14156 821 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 C5orf22Q49AR2 442 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 PAN2Q504Q3 1202 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 UBXN11Q5T124 520 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 AKNAD1Q5T1N1 836 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 SPATA31A1Q5TZJ5 1347 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 TMTC3Q6ZXV5 915 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 ZNF804AQ7Z570 1209 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 VSIG10LQ86VR7 867 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 OSTM1Q86WC4 334 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 TRIML1Q8N9V2 468 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 SYTL5Q8TDW5 730 aaPredicted RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 SH3RF3Q8TEJ3 882 aaPredicted RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 DOT1LQ8TEK3 1739 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CYB5D2Q8WUJ1 264 aa6.88□□□□□ -1.31
DDX1-208ENST00000621973 CACTINQ8WUQ7 758 aaKnown RBP6.88□□□□□ -1.31
DDX1-208ENST00000621973 DOCK2Q92608 1830 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms