RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SV2AQ7L0J3 742 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 FRMD5Q7Z6J6 570 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 ZNF687Q8N1G0 1237 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 BPIFB1Q8TDL5 484 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 CLDN23Q96B33 292 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 BCO2Q9BYV7 579 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 CCL26Q9Y258 94 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 PIAS3Q9Y6X2 628 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 RIF1Q5UIP0 2472 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 A8MXQ7 604 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 MAN2B1O00754 1011 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 IKBKBO14920 756 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 MAPK13O15264 365 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 GRIK1P39086 918 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 RAP1GAPP47736 663 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 VAMP7P51809 220 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 ZCWPW2Q504Y3 356 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 ARHGAP29Q52LW3 1261 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 ZNF667Q5HYK9 610 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 MON1AQ86VX9 555 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 MAML2Q8IZL2 1156 aaPredicted RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 CELF5Q8N6W0 485 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 FAM3CQ92520 227 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 MRPS31Q92665 395 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 USP13Q92995 863 aaPredicted RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 SPATA17Q96L03 361 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 SDCBP2Q9H190 292 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 UXTQ9UBK9 157 aaPredicted RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 ZMYM5Q9UJ78 669 aa19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 NDRG2Q9UN36 371 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 MRPS17Q9Y2R5 130 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 KIF26AQ9ULI4 1882 aaPredicted RBP19.15■□□□□ 0.66
SCAMP4-213ENST00000621748 PTPRZ1P23471 2315 aaPredicted RBP19.14■□□□□ 0.66
SCAMP4-213ENST00000621748 PATJQ8NI35 1801 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 CCNE1P24864 410 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 DDX6P26196 483 aaKnown RBP eCLIP19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 AVPR1AP37288 418 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 SOX9P48436 509 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 CACNA2D1P54289 1103 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 FAM160A1Q05DH4 1040 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 ADAM9Q13443 819 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 SGSM1Q2NKQ1 1148 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 SCARA5Q6ZMJ2 495 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 B3GALNT2Q8NCR0 500 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 TTC8Q8TAM2 541 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 RIN3Q8TB24 985 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 CSGALNACT1Q8TDX6 532 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 ERCC4Q92889 916 aaPredicted RBP19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 B3GNT5Q9BYG0 378 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 TMEM30AQ9NV96 361 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 GTSE1Q9NYZ3 720 aa19.14■□□□□ 0.65
SCAMP4-213ENST00000621748 SOBPA7XYQ1 873 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 F8VP50 259 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 CLDN5O00501 218 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 NCAM2O15394 837 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 GFRA3O60609 400 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 CLSTN1O94985 981 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 MBD3O95983 291 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 TRIM49P0CI25 452 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 TRIM49CP0CI26 452 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 MLLT6P55198 1093 aaPredicted RBP19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 USP46P62068 366 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 TNK2Q07912 1038 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 PPP3CAQ08209 521 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 SPOPLQ6IQ16 392 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 ASCL5Q7RTU5 278 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 FAM186BQ8IYM0 893 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 EEF2KMTQ96G04 330 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 SLC22A12Q96S37 553 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 CYP2S1Q96SQ9 504 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 ZNF518BQ9C0D4 1074 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 TDP1Q9NUW8 608 aa19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 SPATA6Q9NWH7 488 aaPredicted RBP19.13■□□□□ 0.65
SCAMP4-213ENST00000621748 FANCMQ8IYD8 2048 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 GADD45BO75293 160 aaPredicted RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 ASS1P00966 412 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 HLA-DRAP01903 254 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 SP9P0CG40 484 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 PSMC2P35998 433 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 PRCPP42785 496 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 MAGEA9P43362 315 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 RPS9P46781 194 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 GCLMP48507 274 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 KPNA1P52294 538 aaPredicted RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 DENND5BQ6ZUT9 1274 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 INTS8Q75QN2 995 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 SPATA20Q8TB22 786 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 C8orf48Q96LL4 319 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 CEP295NLQ96MC4 621 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 GSDMAQ96QA5 445 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 TRPC7Q9HCX4 862 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.12■□□□□ 0.651e-9■■■■■ 76.9
SCAMP4-213ENST00000621748 GKN1Q9NS71 199 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 RMND1Q9NWS8 449 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 PCDHA5Q9Y5H7 936 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 FAM186AA6NE01 2351 aa19.12■□□□□ 0.65
SCAMP4-213ENST00000621748 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
SCAMP4-213ENST00000621748 TRIM66O15016 1216 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms