RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 BDNFP23560 247 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 RTP2Q5QGT7 225 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 OR6B2Q6IFH4 312 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 DCUN1D2Q6PH85 259 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 SLFN11Q7Z7L1 901 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 MYLPFQ96A32 169 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 VCPIP1Q96JH7 1222 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 L2HGDHQ9H9P8 463 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 IL23AQ9NPF7 189 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 UVRAGQ9P2Y5 699 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 FNDC1Q4ZHG4 1894 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 ALPK3Q96L96 1907 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 ATP8B3O60423 1300 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 TCRBV5S1A1TA0A578 114 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 MYO1FO00160 1098 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 C2CD2LO14523 706 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 KCNK3O14649 394 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 CSPG5O95196 566 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 CALB1P05937 261 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 MYBL1P10243 752 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 TCF4P15884 667 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 NDUFV1P49821 464 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 BTG3Q14201 252 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 AADACL2Q6P093 401 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 FUT10Q6P4F1 479 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 CLEC20AQ6ZU45 233 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 HNRNPABQ99729 332 aaKnown RBP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-216ENST00000621396 CDH9Q9ULB4 789 aa16.79■□□□□ 0.28
CBWD3-216ENST00000621396 KRT3P12035 628 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 ZNF252P-AS1Q0IIN9 211 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 BST2Q10589 180 aaKnown RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 FAM102AQ5T9C2 384 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 COL13A1Q5TAT6 717 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 PIGZQ86VD9 579 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 MYCBPAPQ8TBZ2 947 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 TRIM11Q96F44 468 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 YME1L1Q96TA2 773 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 ACBD6Q9BR61 282 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 SELENOOQ9BVL4 669 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 CDC23Q9UJX2 597 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 F8VP50 259 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 PDE2AO00408 941 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 AP1G2O75843 785 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 PCSK1P29120 753 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 BCAT1P54687 386 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 FPGSQ05932 587 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 RPS6KA1Q15418 735 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 SLC39A12Q504Y0 691 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 INTS6LQ5JSJ4 861 aaKnown RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 PRSS55Q6UWB4 352 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 GPRIN1Q7Z2K8 1008 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 FAM35AQ86V20 835 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 FEZF2Q8TBJ5 459 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 ALG3Q92685 438 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 ZNF689Q96CS4 500 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-216ENST00000621396 SMOQ99835 787 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 COLEC11Q9BWP8 271 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 DUSP16Q9BY84 665 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 AMFRQ9UKV5 643 aa16.78■□□□□ 0.28
CBWD3-216ENST00000621396 TMEM189-UBE2V1I3L0A0 370 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 TRAPPC3O43617 180 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 SPOPO43791 374 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 FGBP02675 491 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 NPR3P17342 541 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 RPL17P18621 184 aaKnown RBP16.77■□□□□ 0.28
CBWD3-216ENST00000621396 GJC1P36383 396 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
CBWD3-216ENST00000621396 STILQ15468 1287 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 SH3PXD2AQ5TCZ1 1133 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 C3orf20Q8ND61 904 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 VN1R3Q9BXE9 311 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
CBWD3-216ENST00000621396 MRPL47Q9HD33 250 aaKnown RBP16.77■□□□□ 0.28
CBWD3-216ENST00000621396 MRPL42Q9Y6G3 142 aaKnown RBP16.77■□□□□ 0.28
CBWD3-216ENST00000621396 COL4A6Q14031 1691 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 TMEM191CA6NGB0 347 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 MTA2O94776 668 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 CYP2F1P24903 491 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 PPP1R15BQ5SWA1 713 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 TRNP1Q6NT89 227 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 SYCE1Q8N0S2 351 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 ZMIZ2Q8NF64 920 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 DPF3Q92784 378 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 DSEQ9UL01 958 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.27
CBWD3-216ENST00000621396 C5orf42Q9H799 3197 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 UNC80Q8N2C7 3258 aa16.77■□□□□ 0.27
CBWD3-216ENST00000621396 REV3LO60673 3130 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms