RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GPD2P43304 727 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 INCA1Q0VD86 236 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 CALCOCO2Q13137 446 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 HADHQ16836 314 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 ADGRF2Q8IZF7 708 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 TTC39CQ8N584 583 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 LRRC52Q8N7C0 313 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 RBM41Q96IZ5 413 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 MED10Q9BTT4 135 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 CALN1Q9BXU9 219 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 FAM105AQ9NUU6 356 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 DNAJC17Q9NVM6 304 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 TIMM13Q9Y5L4 95 aaPredicted RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 GOLGA6L10A6NI86 522 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 SIGLEC16A6NMB1 481 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 OPA1O60313 960 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 CHRNA1P02708 482 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 CDH5P33151 784 aaPredicted RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 RPL21P46778 160 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 AFF1P51825 1210 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 MNAT1P51948 309 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 IFFO1Q0D2I5 559 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 SV2CQ496J9 727 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 CEP85LQ5SZL2 805 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 FOXR1Q6PIV2 292 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 PRUNE1Q86TP1 453 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 SCUBE3Q8IX30 993 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 KATNAL2Q8IYT4 538 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 EXD1Q8NHP7 514 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 RAPGEF5Q92565 580 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 PIWIL1Q96J94 861 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 NGRNQ9NPE2 291 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 WDR35Q9P2L0 1181 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 BRCA2P51587 3418 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 GOLGA6CA6NDK9 693 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 SMIM23A6NLE4 172 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 FSCN2O14926 492 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 SYF2O95926 243 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 GAS8O95995 478 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 POMCP01189 267 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 GOLGA6DP0CG33 693 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 FGFR1P11362 822 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 PDGFRAP16234 1089 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 ADCY8P40145 1251 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 SCNN1GP51170 649 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 NNTQ13423 1086 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 TAF5Q15542 800 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 CCDC142Q17RM4 750 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 C15orf59Q2T9L4 293 aaPredicted RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 PMF1Q6P1K2 205 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 LCLAT1Q6UWP7 414 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 ANKS1BQ7Z6G8 1248 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 RNF180Q86T96 592 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 TAB3Q8N5C8 712 aaPredicted RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 KCTD6Q8NC69 237 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 FBXO25Q8TCJ0 367 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 PIK3R5Q8WYR1 880 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 OSBPL7Q9BZF2 842 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 AGO3Q9H9G7 860 aaKnown RBP10.45□□□□□ -0.74
VTA1-205ENST00000620996 GOLGA6AQ9NYA3 693 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 ZNF148Q9UQR1 794 aa10.45□□□□□ -0.74
VTA1-205ENST00000620996 PODXLO00592 558 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 CYB561D2O14569 222 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 ADAMTS4O75173 837 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 ECHS1P30084 290 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 MAN1A1P33908 653 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 HSD17B3P37058 310 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 PTGIRP43119 386 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 HTRA3P83110 453 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SIX1Q15475 284 aaPredicted RBP10.44□□□□□ -0.74
VTA1-205ENST00000620996 ZBTB6Q15916 424 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SH3PXD2AQ5TCZ1 1133 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 DSTYKQ6XUX3 929 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 TTC30AQ86WT1 665 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 RCOR2Q8IZ40 523 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SLC2A14Q8TDB8 520 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 HASPINQ8TF76 798 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SLITRK1Q96PX8 696 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 B3GNT5Q9BYG0 378 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 DCLK3Q9C098 648 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.44□□□□□ -0.74
VTA1-205ENST00000620996 MTRF1LQ9UGC7 380 aaKnown RBP10.44□□□□□ -0.74
VTA1-205ENST00000620996 TRIP11Q15643 1979 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SYNJ2BP-COX16A0A087WUM0 186 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 AGPSO00116 658 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 GPR182O15218 404 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 IFNB1P01574 187 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 GPD1P21695 349 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 IGFBP6P24592 240 aaPredicted RBP10.44□□□□□ -0.74
VTA1-205ENST00000620996 HOXD10P28358 340 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 PNPLA4P41247 253 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 FNTAP49354 379 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 ADCY2Q08462 1091 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 ITGA7Q13683 1181 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 ZNF268Q14587 947 aaPredicted RBP10.44□□□□□ -0.74
VTA1-205ENST00000620996 ALS2CLQ60I27 953 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 ALKAL1Q6UXT8 129 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SPOCD1Q6ZMY3 1216 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms