RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ACOT1Q86TX2 421 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF513Q8N8E2 541 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 C3orf20Q8ND61 904 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 PLEKHO2Q8TD55 490 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TAS1R2Q8TE23 839 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SEMA4DQ92854 862 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 PGM2Q96G03 612 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 VPS39Q96JC1 886 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 RUNDC3BQ96NL0 473 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 RIT2Q99578 217 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SPATC1LQ9H0A9 340 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ASNSD1Q9NWL6 643 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 GGA2Q9UJY4 613 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TJP3O95049 919 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 GBP1P32455 592 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 GTF2A2P52657 109 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 NOP14P78316 857 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 LMNB2Q03252 620 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 KYNUQ16719 465 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC9A9Q8IVB4 645 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 DNAJB3Q8WWF6 145 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SGSM3Q96HU1 749 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TNIP3Q96KP6 325 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 MCEEQ96PE7 176 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 MYCBPQ99417 103 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 EGFL8Q99944 293 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 CDC42EP4Q9H3Q1 356 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 CTNNAL1Q9UBT7 734 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 DCTN4Q9UJW0 460 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SCINQ9Y6U3 715 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 A0A0G2JND7 137 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 TCP11X1B4DZS4 312 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 PAEPP09466 180 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 RARGP13631 454 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 CHRNB2P17787 502 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 ACAT1P24752 427 aaKnown RBP8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 RBP5P82980 135 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 FMO1Q01740 532 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 LLGL2Q6P1M3 1020 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC7A14Q8TBB6 771 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 SPDL1Q96EA4 605 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 TTC1Q99614 292 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 MTMR12Q9C0I1 747 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 FGFR1OP2Q9NVK5 253 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 PCYOX1Q9UHG3 505 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 LOC102724159A0A0B4J2E5 919 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC25A27O95847 323 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 NCAM1P13591 858 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 MMP13P45452 471 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 PEX5P50542 639 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 CCL23P55773 120 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 PWP2Q15269 919 aaKnown RBP8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 KCNT1Q5JUK3 1230 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 C10orf120Q5SQS8 335 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 ADCK2Q7Z695 626 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 CROCCP2Q86T23 111 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 HPDLQ96IR7 371 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 C9orf72Q96LT7 481 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 PWWP2AQ96N64 755 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
PTPDC1-204ENST00000620992 TMEM120BA0PK00 339 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 RASSF9O75901 435 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 CREB1P16220 341 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 ADCYAP1R1P41586 468 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 DRG2P55039 364 aaKnown RBP8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 SREBF2Q12772 1141 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 TFDP2Q14188 446 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 KLF6Q99612 283 aaPredicted RBP8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 TXLNGYQ9BZA5 131 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 SENP6Q9GZR1 1112 aaPredicted RBP8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 RANBP17Q9H2T7 1088 aaKnown RBP8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 IGFLR1Q9H665 355 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 COL20A1Q9P218 1284 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 GTF3C4Q9UKN8 822 aa8.65□□□□□ -1.03
PTPDC1-204ENST00000620992 BHMG1C9JSJ3 638 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 HBP1O60381 514 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ESRRBO95718 433 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 RPSAP08865 295 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 GZMAP12544 262 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 INSRRP14616 1297 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 MX2P20592 715 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 GTF2H1P32780 548 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 UGCGQ16739 394 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 GPAT2Q6NUI2 795 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM71AQ8IYT1 594 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ZBED8Q8IZ13 594 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 SLC25A41Q8N5S1 370 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 ASCC2Q9H1I8 757 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 TPX2Q9ULW0 747 aaKnown RBP8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 TAF1LQ8IZX4 1826 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 C5orf60A6NFR6 353 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 E5RI56 91 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 P4HA2O15460 535 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 CHKAP35790 457 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 HADHAP40939 763 aa8.64□□□□□ -1.03
PTPDC1-204ENST00000620992 CDR2Q01850 454 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms