RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 ANKRD27Q96NW4 1050 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 SERPINI1Q99574 410 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 LOC100653049A0A140TA62 436 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 A0A1W2PPM1 405 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 KRT34O76011 436 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 STIP1P31948 543 aaKnown RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 GSCP56915 257 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 UGCGQ16739 394 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 LRRC23Q53EV4 343 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 SLC45A4Q5BKX6 768 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 FSCBQ5H9T9 825 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 SH2D4BQ5SQS7 431 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 BTBD10Q9BSF8 475 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 NUF2Q9BZD4 464 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 C2orf40Q9H1Z8 148 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 FCHO1O14526 889 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 ABHD2P08910 425 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 GCLCP48506 637 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 SPRED3Q2MJR0 410 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 VSTM1Q6UX27 236 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 CYP4X1Q8N118 509 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 HELQQ8TDG4 1101 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 HOXC10Q9NYD6 342 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 WRAP73Q9P2S5 460 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 ATP9AO75110 1047 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 OATP04181 439 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 MED21Q13503 144 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 BMPR2Q13873 1038 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 NIPA1Q7RTP0 329 aa12.85□□□□□ -0.35
SPCS1-206ENST00000619898 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
SPCS1-206ENST00000619898 E2F8A0AVK6 867 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 EDF1O60869 148 aaKnown RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 GNAT1P11488 350 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 SKIV2L2P42285 1042 aaKnown RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 HACE1Q8IYU2 909 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 ADGRA3Q8IWK6 1321 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 PTDSS1P48651 473 aaKnown RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 AQP5P55064 265 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 CYP1B1Q16678 543 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 DAW1Q8N136 415 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 CASQ2O14958 399 aaPredicted RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 NAMPTP43490 491 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 NOMO3P69849 1222 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 KPNB1Q14974 876 aaKnown RBP12.84□□□□□ -0.35
SPCS1-206ENST00000619898 TRIP10Q15642 601 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 OTOAQ7RTW8 1153 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 SCUBE1Q8IWY4 988 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 TTC8Q8TAM2 541 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 SAR1AQ9NR31 198 aa12.84□□□□□ -0.35
SPCS1-206ENST00000619898 ZMYM2Q9UBW7 1377 aa12.83□□□□□ -0.35
SPCS1-206ENST00000619898 KBTBD13C9JR72 458 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 PFDN1O60925 122 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 SATB1Q01826 763 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 FAAP100Q0VG06 881 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 WLSQ5T9L3 541 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPCS1-206ENST00000619898 SNX25Q9H3E2 840 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 LRRC4CQ9HCJ2 640 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 EPS15L1Q9UBC2 864 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 MAGEA13PA6NCF6 341 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 MTA2O94776 668 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
SPCS1-206ENST00000619898 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
SPCS1-206ENST00000619898 AP1B1Q10567 949 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 SH3BP5LQ7L8J4 393 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 ARHGAP18Q8N392 663 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 ICA1LQ8NDH6 482 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 FAM13CQ8NE31 585 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 ZNF518BQ9C0D4 1074 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 PAPOLBQ9NRJ5 636 aaKnown RBP12.83□□□□□ -0.36
SPCS1-206ENST00000619898 LRCH1Q9Y2L9 728 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 GPD1P21695 349 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 FASTKD3Q14CZ7 662 aaKnown RBP12.83□□□□□ -0.36
SPCS1-206ENST00000619898 SLC1A5Q15758 541 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.36
SPCS1-206ENST00000619898 ALLCQ8N6M5 410 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 PPP1R36Q96LQ0 422 aa12.83□□□□□ -0.36
SPCS1-206ENST00000619898 LRRC4Q9HBW1 653 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms