RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 CTSWP56202 376 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 SOX8P57073 446 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 GCKRQ14397 625 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 VPS72Q15906 364 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 SPTY2D1Q68D10 685 aaPredicted RBP5.13□□□□□ -1.59
SEM1-220ENST00000619259 IL31Q6EBC2 164 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 SWSAP1Q6NVH7 229 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 SPOCD1Q6ZMY3 1216 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 OR52N2Q8NGI0 321 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 LRTOMTQ8WZ04 291 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 RBM15Q96T37 977 aaKnown RBP eCLIP5.13□□□□□ -1.59
SEM1-220ENST00000619259 MNTQ99583 582 aa5.13□□□□□ -1.59
SEM1-220ENST00000619259 SSBP3Q9BWW4 388 aaPredicted RBP5.13□□□□□ -1.59
SEM1-220ENST00000619259 REXO4Q9GZR2 422 aaKnown RBP5.13□□□□□ -1.59
SEM1-220ENST00000619259 SIDT1Q9NXL6 827 aaKnown RBP5.13□□□□□ -1.59
SEM1-220ENST00000619259 EIF2B4Q9UI10 523 aaKnown RBP5.13□□□□□ -1.59
SEM1-220ENST00000619259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.13□□□□□ -1.59
SEM1-220ENST00000619259 COL14A1Q05707 1796 aaKnown RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 SLC43A1O75387 559 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 FRAT2O75474 233 aaPredicted RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 SURF6O75683 361 aaKnown RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 ANXA1P04083 346 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 HRGP04196 525 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 HDCP19113 662 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 DEKP35659 375 aaKnown RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 MAN2A2P49641 1150 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 MCM2P49736 904 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 NEK3P51956 506 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 NHLH2Q02577 135 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 NEXNQ0ZGT2 675 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 SLC39A6Q13433 755 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 FZD5Q13467 585 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 SYCP2LQ5T4T6 812 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 Q6ZRM9 215 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 TTLL10Q6ZVT0 673 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 GPRIN1Q7Z2K8 1008 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 FAM90A1Q86YD7 464 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 TTC5Q8N0Z6 440 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 FAM43AQ8N2R8 423 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 CELF5Q8N6W0 485 aaKnown RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 SLC17A8Q8NDX2 589 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 C20orf173Q96LM9 149 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 IMPG2Q9BZV3 1241 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 LRRC27Q9C0I9 530 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 RSAD1Q9HA92 442 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 PIH1D1Q9NWS0 290 aaKnown RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 C9orf78Q9NZ63 289 aaPredicted RBP5.12□□□□□ -1.59
SEM1-220ENST00000619259 JKAMPQ9P055 326 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 SLC45A2Q9UMX9 530 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 SNX13Q9Y5W8 968 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 RFX7Q2KHR2 1363 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 LTBP4Q8N2S1 1624 aa5.12□□□□□ -1.59
SEM1-220ENST00000619259 ZNF785A8K8V0 405 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 PMM2O15305 246 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 BRAFP15056 766 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 PTMSP20962 102 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 SLC6A4P31645 630 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 RFX5P48382 616 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 SEMA5AQ13591 1074 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 BRD3Q15059 726 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 CSRP2Q16527 193 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 DCAF17Q5H9S7 520 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 METTL24Q5JXM2 366 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 TSHZ3Q63HK5 1081 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 DRICH1Q6PGQ1 229 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 APOA5Q6Q788 366 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 MAMDC4Q6UXC1 1216 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 Q6ZSN1 163 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 TOM1L2Q6ZVM7 507 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 ZNF365Q70YC5 407 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 COPS6Q7L5N1 327 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 PALM2Q8IXS6 379 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 CLASRPQ8N2M8 674 aaKnown RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 PARD3BQ8TEW8 1205 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 SUCLG2Q96I99 432 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 TEX13AQ9BXU3 409 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 NUP62CLQ9H1M0 184 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 ATP6V0A4Q9HBG4 840 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 KIAA1586Q9HCI6 787 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 ECHDC1Q9NTX5 307 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 ZDHHC8Q9ULC8 765 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 OGDHLQ9ULD0 1010 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 USP15Q9Y4E8 981 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 USP16Q9Y5T5 823 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 RAD50Q92878 1312 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 JCADQ9P266 1359 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 CICQ96RK0 1608 aaPredicted RBP5.11□□□□□ -1.59
SEM1-220ENST00000619259 NUP188Q5SRE5 1749 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 TOGARAM1Q9Y4F4 1720 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 ARFGEF2Q9Y6D5 1785 aa5.11□□□□□ -1.59
SEM1-220ENST00000619259 LEFTY2O00292 366 aa5.1□□□□□ -1.59
SEM1-220ENST00000619259 SCAF4O95104 1147 aaKnown RBP5.1□□□□□ -1.59
SEM1-220ENST00000619259 MATN4O95460 622 aa5.1□□□□□ -1.59
SEM1-220ENST00000619259 IFIT2P09913 472 aaKnown RBP5.1□□□□□ -1.59
SEM1-220ENST00000619259 CKBP12277 381 aa5.1□□□□□ -1.59
SEM1-220ENST00000619259 ZKSCAN1P17029 563 aaPredicted RBP5.1□□□□□ -1.59
SEM1-220ENST00000619259 APOBEC3AP31941 199 aaPredicted RBP5.1□□□□□ -1.59
SEM1-220ENST00000619259 HSPA4P34932 840 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms