RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-224	ENST00000619186	GPX6	P59796	221 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	KCNJ2	P63252	427 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	OTUD4	Q01804	1114 aa	Known RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	PLCB3	Q01970	1234 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	XRCC4	Q13426	336 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	SGSM1	Q2NKQ1	1148 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	FNBP1L	Q5T0N5	605 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	ATF7IP2	Q5U623	682 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	TRNP1	Q6NT89	227 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	RELL1	Q8IUW5	271 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	FITM2	Q8N6M3	262 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	TMEM35B	Q8NCS4	154 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	SLC35B2	Q8TB61	432 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	ACTL9	Q8TC94	416 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CPB2	Q96IY4	423 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	MS4A4A	Q96JQ5	239 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	TGS1	Q96RS0	853 aa	Known RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	STMN4	Q9H169	189 aa	Predicted RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CDT1	Q9H211	546 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	SLCO1B3	Q9NPD5	702 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CLUH	O75153	1309 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	EXOC1L	A0A1B0GW35	172 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CDH16	O75309	829 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CALB1	P05937	261 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	TAC1	P20366	129 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	SSTR1	P30872	391 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CAV1	Q03135	178 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	MBTD1	Q05BQ5	628 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	MMRN1	Q13201	1228 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CELF3	Q5SZQ8	465 aa	Known RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	IER5	Q5VY09	327 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	FAM160B1	Q5W0V3	765 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CROCCP2	Q86T23	111 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	KIF2B	Q8N4N8	673 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	PPP1R13L	Q8WUF5	828 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	PRCC	Q92733	491 aa	Predicted RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	RBM41	Q96IZ5	413 aa	Known RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	SPATA33	Q96N06	139 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	PAIP2	Q9BPZ3	127 aa	Known RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	ELOVL4	Q9GZR5	314 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	IFT122	Q9HBG6	1241 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	METTL5	Q9NRN9	209 aa	Known RBP	11.42	□□□□□ -0.58
TP53-224	ENST00000619186	RNF19A	Q9NV58	838 aa		11.42	□□□□□ -0.58
TP53-224	ENST00000619186	CCDC189	A1A4V9	331 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	CST8	O60676	142 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	LSM8	O95777	96 aa	Known RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	KRT3	P12035	628 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	EIF4B	P23588	611 aa	Known RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	ABCD1	P33897	745 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	ELF3	P78545	371 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	LACTB	P83111	547 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	PDIA2	Q13087	525 aa	Known RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	PDAP1	Q13442	181 aa	Known RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	EFCAB12	Q6NXP0	572 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	MPZL3	Q6UWV2	235 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	NPNT	Q6UXI9	565 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	TRABD2A	Q86V40	505 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	PNMA8A	Q86V59	439 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186	UNC45B	Q8IWX7	931 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	ANKS4B	Q8N8V4	417 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	SLC4A11	Q8NBS3	891 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	PEBP4	Q96S96	227 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	FZD8	Q9H461	694 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	NMRK2	Q9NPI5	230 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	PCDHGC3	Q9UN70	934 aa		11.41	□□□□□ -0.58
TP53-224	ENST00000619186	USP15	Q9Y4E8	981 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-224	ENST00000619186		A8MUI8	341 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	LACTBL1	A8MY62	500 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	NOP56	O00567	594 aa	Known RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	LGR5	O75473	907 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	DNAJC8	O75937	253 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	TMEM63A	O94886	807 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	ITGB3	P05106	788 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	GHR	P10912	638 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	CYP3A5	P20815	502 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	STX2	P32856	288 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	RPA3	P35244	121 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	GTF2A1	P52655	376 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	EFNA5	P52803	228 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	NCALD	P61601	193 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	PSMC1	P62191	440 aa	Known RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	JADE1	Q6IE81	842 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	SDE2	Q6IQ49	451 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	XYLT1	Q86Y38	959 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	UBA3	Q8TBC4	463 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	CPT1B	Q92523	772 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	PTPN18	Q99952	460 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	MAK16	Q9BXY0	300 aa	Known RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	VPS37B	Q9H9H4	285 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	PRKAG3	Q9UGI9	489 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-224	ENST00000619186	TRIP11	Q15643	1979 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	KAT6A	Q92794	2004 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	BTBD19	C9JJ37	291 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	PDHX	O00330	501 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	ACKR2	O00590	384 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	GRAP2	O75791	330 aa		11.4	□□□□□ -0.58
TP53-224	ENST00000619186	MAP3K6	O95382	1288 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms