RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 MRPS23Q9Y3D9 190 aaKnown RBP7.54□□□□□ -1.2
SNX25-207ENST00000618785 ZFP37Q9Y6Q3 630 aaPredicted RBP7.54□□□□□ -1.2
SNX25-207ENST00000618785 ZDBF2Q9HCK1 2354 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 SOAT2O75908 522 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 ZNF18P17022 549 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 BDNFP23560 247 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 GBP2P32456 591 aaPredicted RBP7.54□□□□□ -1.2
SNX25-207ENST00000618785 GRIK1P39086 918 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 EPHA5P54756 1037 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 MFAP3P55082 362 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 NTHL1P78549 312 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 CCDC142Q17RM4 750 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 GET4Q7L5D6 327 aaPredicted RBP7.54□□□□□ -1.2
SNX25-207ENST00000618785 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 PIAS4Q8N2W9 510 aaPredicted RBP7.54□□□□□ -1.2
SNX25-207ENST00000618785 WHAMMQ8TF30 809 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 SMARCD1Q96GM5 515 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 TMEM176AQ96HP8 235 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 TWNKQ96RR1 684 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 VPS16Q9H269 839 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 HCFC1R1Q9NWW0 138 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 KIAA1257Q9ULG3 409 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 PCDHB4Q9Y5E5 795 aa7.54□□□□□ -1.2
SNX25-207ENST00000618785 C19orf67A6NJJ6 358 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 LOC730098B7Z3J9 87 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 MICAL2O94851 1124 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 MYL4P12829 197 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ATF6P18850 670 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 CDR1P51861 262 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 COPB1P53618 953 aaKnown RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 ORC1Q13415 861 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ZNF394Q53GI3 561 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ARHGEF19Q8IW93 802 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ZDHHC14Q8IZN3 488 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 GJD3Q8N144 294 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 UBR7Q8N806 425 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 FEZF2Q8TBJ5 459 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 SPATA17Q96L03 361 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 HEXIM2Q96MH2 286 aaKnown RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 GCNAQ96QF7 691 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ZNF518BQ9C0D4 1074 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 UBE2TQ9NPD8 197 aaPredicted RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 UXTQ9UBK9 157 aaPredicted RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 APEX2Q9UBZ4 518 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CACNA1GO43497 2377 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 GOLGA6L19H0YKK7 550 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 SLC9A1P19634 815 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 PON1P27169 355 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ID4P47928 161 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 RAD23BP54727 409 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 DDR2Q16832 855 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 PHLDB3Q6NSJ2 640 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 RRAGAQ7L523 313 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 DHX40Q8IX18 779 aaKnown RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 HS6ST3Q8IZP7 471 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 FUKQ8N0W3 1084 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 SLC2A14Q8TDB8 520 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CYFIP2Q96F07 1278 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 HNRNPABQ99729 332 aaKnown RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 DMAP1Q9NPF5 467 aaPredicted RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 FAM49BQ9NUQ9 324 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CDH7Q9ULB5 785 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 TCF20Q9UGU0 1960 aaKnown RBP7.53□□□□□ -1.2
SNX25-207ENST00000618785 SLC38A8A6NNN8 435 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CLDN5O00501 218 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 AP1G2O75843 785 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 NOL4O94818 638 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 PAEPP09466 180 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 FAM200BP0CF97 657 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 VDRP11473 427 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CCDC130P13994 396 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CD19P15391 556 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 RFX1P22670 979 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CDC25CP30307 473 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 GPR15P49685 360 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 IQCB1Q15051 598 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 FILIP1LQ4L180 1135 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 ARHGAP17Q68EM7 881 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 TMEM270Q6UE05 265 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 SLC4A11Q8NBS3 891 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 CBX8Q9HC52 389 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 KRT82Q9NSB4 513 aa7.53□□□□□ -1.2
SNX25-207ENST00000618785 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 LGALS16A8MUM7 142 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 C2CD4DB7Z1M9 353 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 F8VP50 259 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.21
SNX25-207ENST00000618785 ADORA2BP29275 332 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 SLC8A3P57103 927 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 STILQ15468 1287 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 ARHGAP15Q53QZ3 475 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 SGO2Q562F6 1265 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 PRSS36Q5K4E3 855 aa7.52□□□□□ -1.21
SNX25-207ENST00000618785 SDHAF4Q5VUM1 108 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms