RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 MTHFD1LQ6UB35 978 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 LAYNQ6UX15 382 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 Q6ZWC4 215 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 USP45Q70EL2 814 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 MEPCEQ7L2J0 689 aaKnown RBP3.79□□□□□ -1.8
TARDBP-220ENST00000618606 GALNT4Q8N4A0 578 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 LRRC71Q8N4P6 559 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 GLG1Q92896 1179 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 ZC3H10Q96K80 434 aaKnown RBP3.79□□□□□ -1.8
TARDBP-220ENST00000618606 TTYH3Q9C0H2 523 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 GLOD4Q9HC38 313 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 PDGFCQ9NRA1 345 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 LMBRD1Q9NUN5 540 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 FEZ2Q9UHY8 353 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-220ENST00000618606 GABRQQ9UN88 632 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 PCDHA1Q9Y5I3 950 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 E5RJQ4 531 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 FCHO1O14526 889 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 FTLP02792 175 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 POU2F2P09086 479 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 HDCP19113 662 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 ARHGAP25P42331 645 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 CDKN1CP49918 316 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 LINC00205P59089 165 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 LILRA4P59901 499 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 NKX6-1P78426 367 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 EXOSC9Q06265 439 aaKnown RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 GTF2H3Q13889 308 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 E2F2Q14209 437 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 TWIST1Q15672 202 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 ARHGAP40Q5TG30 622 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 FCRL6Q6DN72 434 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 MIS18BP1Q6P0N0 1132 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 ABHD11Q8NFV4 315 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 MTMR8Q96EF0 704 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 DAZAP1Q96EP5 407 aaKnown RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 MARK4Q96L34 752 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 LENG8Q96PV6 779 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 VPS33BQ9H267 617 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 ZNF112Q9UJU3 913 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 NDRG4Q9ULP0 352 aaKnown RBP3.78□□□□□ -1.8
TARDBP-220ENST00000618606 SPEF1Q9Y4P9 236 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 AFG3L2Q9Y4W6 797 aa3.78□□□□□ -1.8
TARDBP-220ENST00000618606 WASHC2CQ9Y4E1 1318 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 FER1L4A9Z1Z3 1794 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 CHRM5P08912 532 aaPredicted RBP3.77□□□□□ -1.81
TARDBP-220ENST00000618606 CYP2A6P11509 494 aaPredicted RBP3.77□□□□□ -1.81
TARDBP-220ENST00000618606 CCND1P24385 295 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 VIPR2P41587 438 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 PLS1Q14651 629 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 MEX3CQ5U5Q3 659 aaKnown RBP3.77□□□□□ -1.81
TARDBP-220ENST00000618606 RGS7BPQ6MZT1 257 aaPredicted RBP3.77□□□□□ -1.81
TARDBP-220ENST00000618606 CNGA4Q8IV77 575 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 TERB1Q8NA31 727 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 PIGOQ8TEQ8 1089 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 SOCS4Q8WXH5 440 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 COQ8BQ96D53 544 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 R3HDM4Q96D70 268 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 MOGAT1Q96PD6 335 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 SNX18Q96RF0 628 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 PLEKHM1Q9Y4G2 1056 aa3.77□□□□□ -1.81
TARDBP-220ENST00000618606 TCRBV5S1A1TA0A578 114 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 ALG1L2C9J202 215 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 DTNBO60941 627 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 FGBP02675 491 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 DLDP09622 509 aaKnown RBP3.76□□□□□ -1.81
TARDBP-220ENST00000618606 ATP5F1P24539 256 aaPredicted RBP3.76□□□□□ -1.81
TARDBP-220ENST00000618606 RECQLP46063 649 aaPredicted RBP3.76□□□□□ -1.81
TARDBP-220ENST00000618606 GPSM2P81274 684 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 Q4G0T1 1027 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 KIRREL2Q6UWL6 708 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 ZNF813Q6ZN06 617 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 IRF2BP2Q7Z5L9 587 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 MRPL10Q7Z7H8 261 aaKnown RBP3.76□□□□□ -1.81
TARDBP-220ENST00000618606 PRSS3P2Q8NHM4 247 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 C16orf52Q8NHV5 167 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 NSMCE1Q8WV22 266 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 XAGE5Q8WWM1 108 aa3.76□□□□□ -1.81
TARDBP-220ENST00000618606 SCAF8Q9UPN6 1271 aaKnown RBP3.76□□□□□ -1.81
TARDBP-220ENST00000618606 TTC3P53804 2025 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 H3BUI4 141 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 SOCS2O14508 198 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 EXOC3O60645 756 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 UNC5CO95185 931 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 PDE8BO95263 885 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 PRKCBP05771 671 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 CSF1RP07333 972 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 IL1R2P27930 398 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 LRPAP1P30533 357 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 SOX8P57073 446 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 AMPD3Q01432 767 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 PGS1Q32NB8 556 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 CERKLQ49MI3 558 aaPredicted RBP3.75□□□□□ -1.81
TARDBP-220ENST00000618606 NANOGP1Q8N7R0 232 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 PRPF38AQ8NAV1 312 aaKnown RBP3.75□□□□□ -1.81
TARDBP-220ENST00000618606 ZNF398Q8TD17 642 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 BRIX1Q8TDN6 353 aaKnown RBP3.75□□□□□ -1.81
TARDBP-220ENST00000618606 VCPIP1Q96JH7 1222 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 FAM118BQ9BPY3 351 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 TRNAU1APQ9NX07 287 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms