RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SNX9Q9Y5X1 595 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 RNF180Q86T96 592 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 TADA2BQ86TJ2 420 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 SEMA4AQ9H3S1 761 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 PPANQ9NQ55 473 aaKnown RBP26.72■■□□□ 1.87
VEGFC-202ENST00000618562 SCINQ9Y6U3 715 aa26.72■■□□□ 1.87
VEGFC-202ENST00000618562 TCRBV5S1A1TA0A578 114 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 PSTPIP1O43586 416 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 GJB6O95452 261 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 RPLP2P05387 115 aaKnown RBP26.71■■□□□ 1.87
VEGFC-202ENST00000618562 CALB1P05937 261 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 THPOP40225 353 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 SOX4Q06945 474 aaPredicted RBP26.71■■□□□ 1.87
VEGFC-202ENST00000618562 ITGA7Q13683 1181 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 YTHDF3Q7Z739 585 aaKnown RBP26.71■■□□□ 1.87
VEGFC-202ENST00000618562 GRK7Q8WTQ7 553 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 CENPTQ96BT3 561 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 TSPAN18Q96SJ8 248 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 AGO3Q9H9G7 860 aaKnown RBP26.71■■□□□ 1.87
VEGFC-202ENST00000618562 PARVAQ9NVD7 372 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 CYTH4Q9UIA0 394 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 CEP350Q5VT06 3117 aa26.71■■□□□ 1.87
VEGFC-202ENST00000618562 PIRO00625 290 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 GNRH1P01148 92 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 ACLYP53396 1101 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 KRT17Q04695 432 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 C6orf118Q5T5N4 469 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 TTC39CQ8N584 583 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 HOMER3Q9NSC5 361 aa26.7■■□□□ 1.87
VEGFC-202ENST00000618562 RIPK2O43353 540 aa26.7■■□□□ 1.86
VEGFC-202ENST00000618562 CPP00450 1065 aa26.7■■□□□ 1.86
VEGFC-202ENST00000618562 CD4P01730 458 aa26.7■■□□□ 1.86
VEGFC-202ENST00000618562 HTRA3P83110 453 aa26.7■■□□□ 1.86
VEGFC-202ENST00000618562 TRMT10CQ7L0Y3 403 aaKnown RBP26.7■■□□□ 1.86
VEGFC-202ENST00000618562 ERICH1Q86X53 443 aa26.7■■□□□ 1.86
VEGFC-202ENST00000618562 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.7■■□□□ 1.86
VEGFC-202ENST00000618562 HEXIM2Q96MH2 286 aaKnown RBP26.7■■□□□ 1.86
VEGFC-202ENST00000618562 MRPL45Q9BRJ2 306 aaKnown RBP26.7■■□□□ 1.86
VEGFC-202ENST00000618562 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.7■■□□□ 1.86
VEGFC-202ENST00000618562 KIAA0754O94854 1291 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 VDRP11473 427 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 PTK6Q13882 451 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 C1orf54Q8WWF1 131 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 GOLGA2P5Q9HBQ8 144 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 TRMT13Q9NUP7 481 aaKnown RBP26.69■■□□□ 1.86
VEGFC-202ENST00000618562 FAM105AQ9NUU6 356 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 MEIS3P2A8K0S8 358 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 O00370 1275 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 PTGESO14684 152 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 AGTP01019 485 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 INHAP05111 366 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 ITIH2P19823 946 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 PTPN20Q4JDL3 420 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 RHOT1Q8IXI2 618 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 FEZF2Q8TBJ5 459 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 NT5C1AQ9BXI3 368 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 STMN4Q9H169 189 aaPredicted RBP26.69■■□□□ 1.86
VEGFC-202ENST00000618562 CHST12Q9NRB3 414 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 NME7Q9Y5B8 376 aa26.69■■□□□ 1.86
VEGFC-202ENST00000618562 RGS16O15492 202 aaPredicted RBP26.68■■□□□ 1.86
VEGFC-202ENST00000618562 XPOTO43592 962 aaKnown RBP26.68■■□□□ 1.86
VEGFC-202ENST00000618562 CABYRO75952 493 aa26.68■■□□□ 1.86
VEGFC-202ENST00000618562 MICAL2O94851 1124 aa26.68■■□□□ 1.86
VEGFC-202ENST00000618562 GAS8O95995 478 aa26.68■■□□□ 1.86
VEGFC-202ENST00000618562 RPL7AP62424 266 aaKnown RBP26.68■■□□□ 1.86
VEGFC-202ENST00000618562 ZFP42Q96MM3 310 aa26.68■■□□□ 1.86
VEGFC-202ENST00000618562 DCLK3Q9C098 648 aa26.68■■□□□ 1.86
VEGFC-202ENST00000618562 CNGA2Q16280 664 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 FBXO47Q5MNV8 452 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 CYP4A22Q5TCH4 519 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 KATNAL2Q8IYT4 538 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 RAPGEF5Q92565 580 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 SNF8Q96H20 258 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 TJP2Q9UDY2 1190 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 FRMPD3Q5JV73 1810 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 GPR182O15218 404 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 SPTLC1O15269 473 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 ATF7P17544 494 aaPredicted RBP26.67■■□□□ 1.86
VEGFC-202ENST00000618562 CYP3A5P20815 502 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 MMP13P45452 471 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 CAV1Q03135 178 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 PTK7Q13308 1070 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 SOWAHAQ2M3V2 549 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 DAB2IPQ5VWQ8 1189 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 RHBDF2Q6PJF5 856 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 ZNF784Q8NCA9 323 aaPredicted RBP26.67■■□□□ 1.86
VEGFC-202ENST00000618562 ZNF296Q8WUU4 475 aaPredicted RBP26.67■■□□□ 1.86
VEGFC-202ENST00000618562 CHST7Q9NS84 486 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 ASIC3Q9UHC3 531 aa26.67■■□□□ 1.86
VEGFC-202ENST00000618562 TMEM191CA6NGB0 347 aa26.66■■□□□ 1.86
VEGFC-202ENST00000618562 KLF1Q13351 362 aaPredicted RBP26.66■■□□□ 1.86
VEGFC-202ENST00000618562 TRIM71Q2Q1W2 868 aaKnown RBP26.66■■□□□ 1.86
VEGFC-202ENST00000618562 PPP1R15BQ5SWA1 713 aa26.66■■□□□ 1.86
VEGFC-202ENST00000618562 LHX8Q68G74 356 aa26.66■■□□□ 1.86
VEGFC-202ENST00000618562 DNAJC24Q6P3W2 148 aa26.66■■□□□ 1.86
VEGFC-202ENST00000618562 PPP1R10Q96QC0 940 aaKnown RBP26.66■■□□□ 1.86
VEGFC-202ENST00000618562 CPXM1Q96SM3 734 aa26.66■■□□□ 1.86
VEGFC-202ENST00000618562 ROPN1BQ9BZX4 212 aaPredicted RBP26.66■■□□□ 1.86
VEGFC-202ENST00000618562 ROPN1Q9HAT0 212 aaPredicted RBP26.66■■□□□ 1.86
VEGFC-202ENST00000618562 C5orf60A6NFR6 353 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms