RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 FAAP100Q0VG06 881 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 WDR45BQ5MNZ6 344 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 SDE2Q6IQ49 451 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 BRSK1Q8TDC3 778 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 EPS8L3Q8TE67 593 aaKnown RBP12.69□□□□□ -0.38
SRRT-216ENST00000618262 ARHGEF2Q92974 986 aaKnown RBP12.69□□□□□ -0.38
SRRT-216ENST00000618262 LPPQ93052 612 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ADAMTS10Q9H324 1103 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 VIPAS39Q9H9C1 493 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 TMEM39AQ9NV64 488 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ARHGAP28Q9P2N2 729 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 BAIAP2L1Q9UHR4 511 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ZNF711Q9Y462 761 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 KLHL41O60662 606 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 LRRN2O75325 713 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 AKAP3O75969 853 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 SEC24DO94855 1032 aaPredicted RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 SERPINC1P01008 464 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 NR3C1P04150 777 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 PSMA3P25788 255 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 PHKA2P46019 1235 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 WNT7BP56706 349 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 PTENP60484 403 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 P3H1Q32P28 736 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 TWF2Q6IBS0 349 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 RBM14Q96PK6 669 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 ACCSQ96QU6 501 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 FAM167BQ9BTA0 163 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 CELF4Q9BZC1 486 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 PFDN2Q9UHV9 154 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 ATPIF1Q9UII2 106 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 INTUQ9ULD6 942 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 SMIM35A0A1B0GVV1 85 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 TLDC2A0PJX2 215 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 DNAJC8O75937 253 aaPredicted RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 PRKACBP22694 351 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 S100A1P23297 94 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 DLG4P78352 724 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 MRPS35P82673 323 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 MRPS6P82932 125 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 TFDP1Q14186 410 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 EPM2AIP1Q7L775 607 aaPredicted RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 HS2ST1Q7LGA3 356 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 NECAB2Q7Z6G3 386 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 GUF1Q8N442 669 aaKnown RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 LINC01465Q8N7H1 131 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 WDR60Q8WVS4 1066 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 ALPK1Q96QP1 1244 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 PLCB1Q9NQ66 1216 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
SRRT-216ENST00000618262 PCDHGB3Q9Y5G1 929 aa12.68□□□□□ -0.38
SRRT-216ENST00000618262 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 CLDN3O15551 220 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 S100BP04271 92 aaPredicted RBP12.67□□□□□ -0.38
SRRT-216ENST00000618262 CCNE1P24864 410 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 AFF1P51825 1210 aaKnown RBP12.67□□□□□ -0.38
SRRT-216ENST00000618262 GTF2BQ00403 316 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 C7orf61Q8IZ16 206 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 DPF3Q92784 378 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 CGREF1Q99674 301 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
SRRT-216ENST00000618262 B3GNT4Q9C0J1 378 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 GGA2Q9UJY4 613 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 AKR1B15C9JRZ8 316 aaPredicted RBP12.67□□□□□ -0.38
SRRT-216ENST00000618262 ASAP2O43150 1006 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 UPP2O95045 317 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 SULT2A1Q06520 285 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 SESTD1Q86VW0 696 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 TSEN34Q9BSV6 310 aaKnown RBP12.67□□□□□ -0.38
SRRT-216ENST00000618262 MSTO1Q9BUK6 570 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 SATB2Q9UPW6 733 aa12.67□□□□□ -0.38
SRRT-216ENST00000618262 CABYRO75952 493 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 GSTT2P0CG29 244 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 GSTT2BP0CG30 244 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 DARSP14868 501 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 ATF7IP2Q5U623 682 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 NXNQ6DKJ4 435 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 CYP26C1Q6V0L0 522 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 TRAPPC9Q96Q05 1148 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 NXF3Q9H4D5 531 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 PIF1Q9H611 641 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms