RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GRK4P32298 578 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 TAF6P49848 677 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 ATN1P54259 1190 aaPredicted RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 DYNLT1P63172 113 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 DR1Q01658 176 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 POU5F1Q01860 360 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 MBTPS1Q14703 1052 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 SIX1Q15475 284 aaPredicted RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 KIAA0319Q5VV43 1072 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 FAM183BPQ6ZVS7 135 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 IFT20Q8IY31 132 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 CCDC105Q8IYK2 499 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 PCSK9Q8NBP7 692 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 AENQ8WTP8 325 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 CFAP57Q96MR6 1250 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 PPP1R10Q96QC0 940 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 RHOBTB2Q9BYZ6 727 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 SCINQ9Y6U3 715 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 UNC80Q8N2C7 3258 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 HUS1O60921 280 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 ITGB1P05556 798 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 THP07101 528 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 CKBP12277 381 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 KCNE1P15382 129 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 CTNNA2P26232 953 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 CDH5P33151 784 aaPredicted RBP8.21□□□□□ -1.09
NEK3-207ENST00000617054 ATXN1P54253 815 aaKnown RBP8.21□□□□□ -1.09
NEK3-207ENST00000617054 MFSD7Q6UXD7 560 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 RTN4RL1Q86UN2 441 aaPredicted RBP8.21□□□□□ -1.09
NEK3-207ENST00000617054 NT5DC4Q86YG4 428 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 ADGRF2Q8IZF7 708 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 KRT222Q8N1A0 295 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 C3orf20Q8ND61 904 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 LHX5Q9H2C1 402 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.09
NEK3-207ENST00000617054 STARD7Q9NQZ5 370 aa8.21□□□□□ -1.09
NEK3-207ENST00000617054 GPR182O15218 404 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 ECHS1P30084 290 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 BRCC3P46736 316 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 SKIDA1Q1XH10 827 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 LCLAT1Q6UWP7 414 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 RHOT1Q8IXI2 618 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 HSPH1Q92598 858 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 ZNF518BQ9C0D4 1074 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 UNC93B1Q9H1C4 597 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 SNX25Q9H3E2 840 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 IP6K2Q9UHH9 426 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 C5orf42Q9H799 3197 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 LRRD1A4D1F6 860 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 LRCH4O75427 683 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 B3GAT3O94766 335 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 CD4P01730 458 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 OAS2P29728 719 aaKnown RBP8.21□□□□□ -1.1
NEK3-207ENST00000617054 GGCXP38435 758 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 NDUFV1P49821 464 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 PCBP1Q15365 356 aaKnown RBP eCLIP8.21□□□□□ -1.1
NEK3-207ENST00000617054 GLE1Q53GS7 698 aaKnown RBP8.21□□□□□ -1.1
NEK3-207ENST00000617054 XKR4Q5GH76 650 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 UBAP2Q5T6F2 1119 aaKnown RBP8.21□□□□□ -1.1
NEK3-207ENST00000617054 SCYL2Q6P3W7 929 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 TAB3Q8N5C8 712 aaPredicted RBP8.21□□□□□ -1.1
NEK3-207ENST00000617054 LRRC52Q8N7C0 313 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 TTC7AQ9ULT0 858 aaPredicted RBP8.21□□□□□ -1.1
NEK3-207ENST00000617054 DERAQ9Y315 318 aa8.21□□□□□ -1.1
NEK3-207ENST00000617054 GOLGA6L10A0A0M3HER8 536 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 SIGLEC16A6NMB1 481 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 CCDC188H7C350 402 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 B4GALT3O60512 393 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 FKTNO75072 461 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MAP3K6O95382 1288 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 KRT1P04264 644 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 SLC1A1P43005 524 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PLTPP55058 493 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MAATS1Q7Z4T9 603 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 JAMLQ86YT9 394 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 OR2W6PQ8NHA6 318 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 CCDC26Q8TAB7 109 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MRRFQ96E11 262 aaKnown RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 SENP8Q96LD8 212 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 DEFB118Q96PH6 123 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 KCNK16Q96T55 309 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 ADAM33Q9BZ11 813 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 HPCAL4Q9UM19 191 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEK3-207ENST00000617054 TET1Q8NFU7 2136 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 XIRP2A4UGR9 3374 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 SYNJ2BP-COX16A0A087WUM0 186 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PITPNM1O00562 1244 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PODXLO00592 558 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PAPSS1O43252 624 aaPredicted RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 PDGFRAP16234 1089 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 VAC14Q08AM6 782 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 TRIM71Q2Q1W2 868 aaKnown RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 ODF2Q5BJF6 829 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MDH1BQ5I0G3 518 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 CCDC33Q8N5R6 958 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 SLC35F5Q8WV83 523 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms