RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 CNPY1Q3B7I2 92 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 MSS51Q4VC12 460 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 ATP13A4Q4VNC1 1196 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 PODNQ7Z5L7 613 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 MRRFQ96E11 262 aaKnown RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 WWP1Q9H0M0 922 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 SSX2IPQ9Y2D8 614 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 SCN9AQ15858 1988 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.3■□□□□ 0.2
GPN1-212ENST00000616939 B2RBV5 119 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 PENKP01210 267 aaPredicted RBP16.3■□□□□ 0.2
GPN1-212ENST00000616939 BGNP21810 368 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 SFNP31947 248 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 ZNF132P52740 706 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 PTK7Q13308 1070 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 LIN52Q52LA3 116 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 C2CD6Q53TS8 623 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 XKR9Q5GH70 373 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 ANKRD22Q5VYY1 191 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 RIPOR1Q6ZS17 1223 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 BBS12Q6ZW61 710 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 LDHDQ86WU2 507 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 PALM2Q8IXS6 379 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 PDIK1LQ8N165 341 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 EZH1Q92800 747 aaPredicted RBP16.3■□□□□ 0.2
GPN1-212ENST00000616939 NMUR2Q9GZQ4 415 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 EPB41L1Q9H4G0 881 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 HERC5Q9UII4 1024 aaKnown RBP16.3■□□□□ 0.2
GPN1-212ENST00000616939 SERPINA10Q9UK55 444 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 SORCS3Q9UPU3 1222 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
GPN1-212ENST00000616939 I3L4J1 428 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 BUD23O43709 281 aaKnown RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 BANF1O75531 89 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 CCNFP41002 786 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 VPS72Q15906 364 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 DBN1Q16643 649 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 UGCGQ16739 394 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 ATG16L1Q676U5 607 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 IZUMO2Q6UXV1 221 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 CCNJLQ8IV13 435 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 ST13P4Q8IZP2 240 aaPredicted RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 UBR7Q8N806 425 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 FNBP1Q96RU3 617 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 EPAS1Q99814 870 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 TMEM121Q9BTD3 319 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 C3orf70A6NLC5 250 aaPredicted RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 CFHP08603 1231 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 STIP1P31948 543 aaKnown RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 RPL22P35268 128 aaKnown RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 CDC16Q13042 620 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 PLA2G4FQ68DD2 849 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 MARK2Q7KZI7 788 aaKnown RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
GPN1-212ENST00000616939 B4GALNT2Q8NHY0 566 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 SERAC1Q96JX3 654 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 FAM111AQ96PZ2 611 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 PANX3Q96QZ0 392 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 MIS12Q9H081 205 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 NDUFA13Q9P0J0 144 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 ZNF180Q9UJW8 692 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 STYXL1Q9Y6J8 313 aa16.29■□□□□ 0.2
GPN1-212ENST00000616939 WDR64B1ANS9 1081 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 VNN1O95497 513 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 IFNB1P01574 187 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 PABPC4LP0CB38 370 aaKnown RBP16.28■□□□□ 0.2
GPN1-212ENST00000616939 UBTFL6P0CB48 400 aaPredicted RBP16.28■□□□□ 0.2
GPN1-212ENST00000616939 TCF4P15884 667 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 CLCN2P51788 898 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 ZNF200P98182 395 aaPredicted RBP16.28■□□□□ 0.2
GPN1-212ENST00000616939 KRT76Q01546 638 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 LSAMPQ13449 338 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 STRIP1Q5VSL9 837 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 TDRD10Q5VZ19 366 aaKnown RBP16.28■□□□□ 0.2
GPN1-212ENST00000616939 TREML1Q86YW5 311 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 PASD1Q8IV76 773 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 BSNDQ8WZ55 320 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 TTC17Q96AE7 1141 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 CCDC106Q9BWC9 280 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 ZNF518BQ9C0D4 1074 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 SCN4AP35499 1836 aa16.28■□□□□ 0.2
GPN1-212ENST00000616939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 GOLGA8RI6L899 631 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 TMEM63AO94886 807 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 INHBAP08476 426 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 RPL7AP62424 266 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms