RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 PDE4CQ08493 712 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 CUL1Q13616 776 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 CYP1B1Q16678 543 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 ATP13A4Q4VNC1 1196 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 ZFYVE27Q5T4F4 411 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 LRRC38Q5VT99 294 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 WSCD1Q658N2 575 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 TXNRD3NBQ6F5E7 133 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 TTC27Q6P3X3 843 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 EMBQ6PCB8 327 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 CRYBG2Q8N1P7 616 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 C3orf58Q8NDZ4 430 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 EXD1Q8NHP7 514 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 PIWIL1Q96J94 861 aaKnown RBP10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 DNAI2Q9GZS0 605 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 PHF24Q9UPV7 400 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 SQORQ9Y6N5 450 aa10.55□□□□□ -0.72
AL353770.3-201ENST00000616253 PI4K2BG5E9Z4 385 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ARVCFO00192 962 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 POMCP01189 267 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RALAP11233 206 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 BCAT1P54687 386 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 CBX1P83916 185 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 BST2Q10589 180 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 HLTFQ14527 1009 aaKnown RBP eCLIP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SMC1AQ14683 1233 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 CCDC142Q17RM4 750 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 CCDC137Q6PK04 289 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ANKS1BQ7Z6G8 1248 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 DDX42Q86XP3 938 aaKnown RBP eCLIP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 JAMLQ86YT9 394 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 B3GALNT2Q8NCR0 500 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SLC2A14Q8TDB8 520 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SLC35F5Q8WV83 523 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 MAIP1Q8WWC4 291 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 C1orf54Q8WWF1 131 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ACSF2Q96CM8 615 aaPredicted RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 PGBD4Q96DM1 585 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RBM41Q96IZ5 413 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 TNIP3Q96KP6 325 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SENP8Q96LD8 212 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 HEMGNQ9BXL5 484 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SLC4A5Q9BY07 1137 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 OSBPL8Q9BZF1 889 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ZMYND15Q9H091 742 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 PCYOX1Q9UHG3 505 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 HPCAL4Q9UM19 191 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 INPP5FQ9Y2H2 1132 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 UTP11Q9Y3A2 253 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 FAM187AA6NFU0 413 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 DAPK3O43293 454 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 LRCH4O75427 683 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SKIP12755 728 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ACAT1P24752 427 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 TKTP29401 623 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ECHS1P30084 290 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RPL9P32969 192 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 COILP38432 576 aaPredicted RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 PTGIRP43119 386 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 FNTAP49354 379 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SLC25A11Q02978 314 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 NNTQ13423 1086 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 PKN2Q16513 984 aaKnown RBP10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 OLFML1Q6UWY5 402 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ECHDC2Q86YB7 292 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RCOR2Q8IZ40 523 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ARFGAP1Q8N6T3 406 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ANKRD52Q8NB46 1076 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 ZBTB9Q96C00 473 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RUNDC3BQ96NL0 473 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 SLITRK1Q96PX8 696 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 PAAF1Q9BRP4 392 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RAB17Q9H0T7 212 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 UNC93B1Q9H1C4 597 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 DPH5Q9H2P9 285 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 VIPAS39Q9H9C1 493 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 RASAL2Q9UJF2 1139 aa10.54□□□□□ -0.72
AL353770.3-201ENST00000616253 C2CD4BA6NLJ0 364 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 GABRDO14764 452 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 ATP2C2O75185 946 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 GRAP2O75791 330 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 GABBR2O75899 941 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 GPD1P21695 349 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 CETN2P41208 172 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 GRIK3Q13003 919 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 KLF1Q13351 362 aaPredicted RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 UPP1Q16831 310 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms