RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SKIP12755 728 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPD1P21695 349 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CHKAP35790 457 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 GEN1Q17RS7 908 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 SEC14L1Q92503 715 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CFAP36Q96G28 342 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 APOBEC3GQ9HC16 384 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 CD248Q9HCU0 757 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 NPHS2Q9NP85 383 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPRC5DQ9NZD1 345 aa5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 PIN4Q9Y237 131 aaKnown RBP5.89□□□□□ -1.47
SYNCRIP-204ENST00000616122 DNM1LO00429 736 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ALOX15BO15296 676 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 HMGCRP04035 888 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 GJB1P08034 283 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 GSTA1P08263 222 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 UNGP13051 313 aaPredicted RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.88□□□□□ -1.476e-6■■■□□ 14.6
SYNCRIP-204ENST00000616122 TRABD2AQ86V40 505 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC26A11Q86WA9 606 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 CKAP2Q8WWK9 683 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 WNK4Q96J92 1243 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF560Q96MR9 790 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TEPSINQ96N21 525 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TMEM134Q9H6X4 195 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 SMYD2Q9NRG4 433 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TSPAN16Q9UKR8 245 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 PHTF1Q9UMS5 762 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZMYM2Q9UBW7 1377 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 F5H423 210 aaPredicted RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCDC22O60826 627 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 MAFO75444 373 aaPredicted RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 RPL22P35268 128 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 GEMIN4P57678 1058 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 PLCB4Q15147 1175 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KBTBD12Q3ZCT8 623 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 C1orf220Q5T0J3 134 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 HIPK4Q8NE63 616 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 GABPB2Q8TAK5 448 aaPredicted RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ATXN2LQ8WWM7 1075 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TMEM176AQ96HP8 235 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TUBB6Q9BUF5 446 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TSSK1BQ9BXA7 367 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 SIK2Q9H0K1 926 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 WWP1Q9H0M0 922 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 MROH8Q9H579 483 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ACSS3Q9H6R3 686 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 USP18Q9UMW8 372 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 DUOX1Q9NRD9 1551 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 RGS20O76081 388 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 QPCTQ16769 361 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 MROH9Q5TGP6 573 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 POLNQ7Z5Q5 900 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZCCHC9Q8N567 271 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 JOSD2Q8TAC2 188 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KAT2BQ92831 832 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TTC1Q99614 292 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ECT2Q9H8V3 914 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 DRG1Q9Y295 367 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 NFASCO94856 1347 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 LOC100653049A0A140TA62 436 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KCNK1O00180 336 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 CREB3O43889 395 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 MSCO60682 206 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KRT34O76011 436 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 MX2P20592 715 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ACO1P21399 889 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 GCKP35557 465 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 NDST1P52848 882 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 VGLL4Q14135 290 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 DSTYKQ6XUX3 929 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KIAA0319LQ8IZA0 1049 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZDHHC14Q8IZN3 488 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 AGGF1Q8N302 714 aaeCLIP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPRC5AQ8NFJ5 357 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM172AQ8WUF8 416 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TFAP2BQ92481 460 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 VPS39Q96JC1 886 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 C12orf42Q96LP6 360 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 NAT9Q9BTE0 207 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 UBQLN1Q9UMX0 589 aaKnown RBP5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ACTL7BQ9Y614 415 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ADAMTSL3P82987 1691 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 E5RJQ4 531 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 H0YGN5 161 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 PAEPP09466 180 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 DCAF6Q58WW2 860 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 EFHC2Q5JST6 749 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 DCAF12L1Q5VU92 463 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KCNV2Q8TDN2 545 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 MTBPQ96DY7 904 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM167BQ9BTA0 163 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 VCXQ9H320 206 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 TNFSF13BQ9Y275 285 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 NFS1Q9Y697 457 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP2C8P10632 490 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 PTGIRP43119 386 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 SERPINB4P48594 390 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 KDSRQ06136 332 aa5.88□□□□□ -1.47
SYNCRIP-204ENST00000616122 ANKRD20A8PQ5CZ79 823 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms