RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CDC73Q6P1J9 531 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 PARGQ86W56 976 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 MPP5Q8N3R9 675 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 C19orf18Q8NEA5 215 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 FAM129BQ96TA1 746 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 VAV3Q9UKW4 847 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 CYP2D7A0A087X1C5 515 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 ZNF839A8K0R7 811 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 KMOO15229 486 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 FGGP02679 453 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 NUMBP49757 651 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 EPHB4P54760 987 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 RHOAP61586 193 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 GPC5P78333 572 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 WLSQ5T9L3 541 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 B3GAT3O94766 335 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 MYL2P10916 166 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 PABPC1P11940 636 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 HSPA13P48723 471 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 VAMP7P51809 220 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 OXCT1P55809 520 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 C2orf54Q08AI8 447 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 MEA1Q16626 185 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 WDR35Q9P2L0 1181 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 ALDH2P05091 517 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 DPY30Q9C005 99 aa13.1□□□□□ -0.31
TCF4-248ENST00000616053 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
TCF4-248ENST00000616053 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 GJA1P17302 382 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 LBPP18428 481 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 ITGALP20701 1170 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 STILQ15468 1287 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 THOC7Q6I9Y2 204 aaKnown RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 CXorf40BQ96DE9 158 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 RMND5BQ96G75 393 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 EIF3BP55884 814 aaKnown RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 ABRQ12979 859 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 JSRP1Q96MG2 331 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 SLC12A4Q9UP95 1085 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 ENTPD4Q9Y227 616 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 NCF1BA6NI72 391 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 NCF1CA8MVU1 366 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 PRPF3O43395 683 aaKnown RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 APRTP07741 180 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 NCF1P14598 390 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 SKIV2L2P42285 1042 aaKnown RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 KRT35Q92764 455 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 OR6B1O95007 311 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CAV1Q03135 178 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 RPAINQ86UA6 219 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CCDC103Q8IW40 242 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 OR5T3Q8NGG3 340 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 RERGQ96A58 199 aaPredicted RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 SLC35C2Q9NQQ7 365 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 PPP2R2CQ9Y2T4 447 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 VAC14Q08AM6 782 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CNGA3Q16281 694 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 ANGEL2Q5VTE6 544 aaKnown RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 GGA3Q9NZ52 723 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 EHBP1L1Q8N3D4 1523 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CENPXA8MT69 81 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 FAM220BPB1ANY3 271 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 GGCXP38435 758 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CASP6P55212 293 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 C1DQ13901 141 aaKnown RBP13.09□□□□□ -0.31
TCF4-248ENST00000616053 HSDL2Q6YN16 418 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 CASP10Q92851 521 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
TCF4-248ENST00000616053 NCAPD3P42695 1498 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 ZNF335Q9H4Z2 1342 aaPredicted RBP13.08□□□□□ -0.31
TCF4-248ENST00000616053 POLRMTO00411 1230 aaKnown RBP13.08□□□□□ -0.31
TCF4-248ENST00000616053 KPNA3O00505 521 aaPredicted RBP13.08□□□□□ -0.31
TCF4-248ENST00000616053 KRT75O95678 551 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 ATP5JP18859 108 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 PLCG1P19174 1290 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 ACADSBP45954 432 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 GRB14Q14449 540 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 TAF8Q7Z7C8 310 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 ZNF227Q86WZ6 799 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms