RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 FAM96AQ9H5X1 160 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 VAV3Q9UKW4 847 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 IPPQ9Y573 584 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 MORC2Q9Y6X9 1032 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 LRP6O75581 1613 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ANXA9O76027 345 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ASMTLO95671 621 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 PLEKP08567 350 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 SPATA31C1P0DKV0 1188 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TMPRSS15P98073 1019 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 NCAPHQ15003 741 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 POLD3Q15054 466 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 NOMO2Q5JPE7 1267 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 UNC93AQ86WB7 457 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 IFNL1Q8IU54 200 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ZNF606Q8WXB4 792 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 CYTH2Q99418 400 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 EGFL8Q99944 293 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 FRMD8Q9BZ67 464 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 CDT1Q9H211 546 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TSPYL2Q9H2G4 693 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 ST3GAL5Q9UNP4 418 aa9.85□□□□□ -0.83
CLTCL1-208ENST00000615606 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 PARNO95453 639 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 ACAT1P24752 427 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 STIP1P31948 543 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 POU5F1BQ06416 359 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC12A1Q13621 1099 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TTC19Q6DKK2 380 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TIGD7Q6NT04 549 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 ANO5Q75V66 913 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 ZNF384Q8TF68 577 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 DNAJC19Q96DA6 116 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 HACD3Q9P035 362 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 GIT1Q9Y2X7 761 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 A0A0A6YYK5 440 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SEPT4O43236 478 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 RRM1P23921 792 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TYK2P29597 1187 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 ZNF268Q14587 947 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 HSDL1Q3SXM5 330 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TBC1D1Q86TI0 1168 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC9A9Q8IVB4 645 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 WDR75Q8IWA0 830 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 CALML6Q8TD86 181 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 MS4A14Q96JA4 679 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 VCX3BQ9H321 246 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 KCNF1Q9H3M0 494 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 DUOX1Q9NRD9 1551 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 CFAP99D6REC4 459 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TRIM66O15016 1216 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 YWHAQP27348 245 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 CD52P31358 61 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 NCKAP1LP55160 1127 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 UGCGQ16739 394 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TSNAXIP1Q2TAA8 658 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 PPM1LQ5SGD2 360 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 HP1BP3Q5SSJ5 553 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 EPM2AIP1Q7L775 607 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 LINC00523Q86TU6 105 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 RXFP2Q8WXD0 754 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 N4BP2L2Q92802 583 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TNFRSF25Q93038 417 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 VCPIP1Q96JH7 1222 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SEZ6LQ9BYH1 1024 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 NUF2Q9BZD4 464 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 XPO7Q9UIA9 1087 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SF3B1O75533 1304 aaKnown RBP eCLIP9.84□□□□□ -0.834e-6■■■■■ 174.1
CLTCL1-208ENST00000615606 ZNF185O15231 689 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 NVLO15381 856 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SPAG6O75602 509 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 PROSCO94903 275 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 RALBP11234 206 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 RPL9P32969 192 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 CLEC4DQ8WXI8 215 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 BRI3BPQ8WY22 251 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 FUCA2Q9BTY2 467 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 TUBB6Q9BUF5 446 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 RNPEPQ9H4A4 650 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 MRPL17Q9NRX2 175 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 NSMCE4AQ9NXX6 385 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 AIPL1Q9NZN9 384 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 ZC3H7BQ9UGR2 993 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 BAIAP2L1Q9UHR4 511 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC25A13Q9UJS0 675 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 C2CD2Q9Y426 696 aa9.84□□□□□ -0.83
CLTCL1-208ENST00000615606 FDFT1P37268 417 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 OXCT1P55809 520 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 MCL1Q07820 350 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF571Q7Z3V5 609 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC13A5Q86YT5 568 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC20A1Q8WUM9 679 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 SH3KBP1Q96B97 665 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 TSPAN17Q96FV3 270 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 ZBTB18Q99592 522 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 DDX20Q9UHI6 824 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 AP4E1Q9UPM8 1137 aa9.83□□□□□ -0.84
CLTCL1-208ENST00000615606 NDUFS3O75489 264 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms