RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IL17RAQ96F46 866 aa10.16□□□□□ -0.78
TNFRSF9-204ENST00000615230 EEF2KMTQ96G04 330 aa10.16□□□□□ -0.78
TNFRSF9-204ENST00000615230 SPACA7Q96KW9 195 aa10.16□□□□□ -0.78
TNFRSF9-204ENST00000615230 ABCC13Q9NSE7 274 aa10.16□□□□□ -0.78
TNFRSF9-204ENST00000615230 SNCAIPQ9Y6H5 919 aa10.16□□□□□ -0.78
TNFRSF9-204ENST00000615230 CASTOR2A6NHX0 329 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 HIRAP54198 1017 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 TBX4P57082 545 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 BEX3Q00994 111 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 OTOP1Q7RTM1 612 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 VPS28Q9UK41 221 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 C1QTNF3-AMACRE9PGA6 284 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ZNF263O14978 683 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ATP1A1P05023 1023 aaKnown RBP10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ITGALP20701 1170 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 RHOAP61586 193 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 GPS1Q13098 491 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 SPARCL1Q14515 664 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ELF2Q15723 593 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 KIF19Q2TAC6 998 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 KLHDC7AQ5VTJ3 777 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 MTMR12Q9C0I1 747 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 DDIT4Q9NX09 232 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 GLUD1P00367 558 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 SH3BGRP55822 239 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ART3Q13508 389 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 AAK1Q2M2I8 961 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 FAM9CQ8IZT9 166 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 C2orf15Q8WU43 125 aaKnown RBP10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 RSRC1Q96IZ7 334 aaKnown RBP10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 YIPF2Q9BWQ6 316 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 ATP8A1Q9Y2Q0 1164 aa10.15□□□□□ -0.78
TNFRSF9-204ENST00000615230 HEATR9A2RTY3 570 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 ADH1CP00326 375 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 INHAP05111 366 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 USP17L7P0C7H9 530 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMEM119Q4V9L6 283 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 METTL16Q86W50 562 aaKnown RBP10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 EXT2Q93063 718 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 TBCBQ99426 244 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 LRP6O75581 1613 aa10.15□□□□□ -0.79
TNFRSF9-204ENST00000615230 C2orf54Q08AI8 447 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GRM3Q14832 879 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 ACAP1Q15027 740 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TRIP13Q15645 432 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 FAM46CQ5VWP2 391 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 LRRC8DQ7L1W4 858 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 NLRP9Q7RTR0 991 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CERS5Q8N5B7 392 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 UBA3Q8TBC4 463 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMEM60Q9H2L4 133 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 STX7O15400 261 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 PHF2O75151 1096 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 HADHAP40939 763 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 LBRQ14739 615 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CDC26Q8NHZ8 85 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TRAIPQ9BWF2 469 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 XAB2Q9HCS7 855 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 A0A1B0GTH6 734 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 WEE2P0C1S8 567 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 ACO1P21399 889 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TGM2P21980 687 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 EFEMP1Q12805 493 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 FNDC3BQ53EP0 1204 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 TRMT11Q7Z4G4 463 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 MAP4K3Q8IVH8 894 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZNF507Q8TCN5 953 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CPA5Q8WXQ8 436 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GLMNQ92990 594 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 A0A087WWV3 80 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 POLBP06746 335 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 BRD2P25440 801 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 STIP1P31948 543 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 ICAM3P32942 547 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GRK3P35626 688 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CHKAP35790 457 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GLUD2P49448 558 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 MAP3K7CLP57077 242 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 OCRLQ01968 901 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 STAT4Q14765 748 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 MRNIPQ6NTE8 343 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CLEC17AQ6ZS10 378 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 SUSD6Q92537 303 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 UPF3AQ9H1J1 476 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 SMARCAL1Q9NZC9 954 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 GTF3C4Q9UKN8 822 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 PHRF1Q9P1Y6 1649 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CCDC160A6NGH7 325 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 CHUKO15111 745 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 DNAJB2P25686 324 aa10.14□□□□□ -0.79
TNFRSF9-204ENST00000615230 HSPA9P38646 679 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms