RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SMC1AQ14683 1233 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 CLEC16AQ2KHT3 1053 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 GOLGA7BQ2TAP0 167 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 MDH1BQ5I0G3 518 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 INTS6LQ5JSJ4 861 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 FAM171A1Q5VUB5 890 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 PRSS55Q6UWB4 352 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 RSPO2Q6UXX9 243 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 TMC7Q7Z402 723 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 LRRTM3Q86VH5 581 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 PASD1Q8IV76 773 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 CCDC170Q8IYT3 715 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 CRYBG2Q8N1P7 616 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 WDTC1Q8N5D0 677 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 B3GALNT2Q8NCR0 500 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 SPATA18Q8TC71 538 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM169Q96HH4 297 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 HEXIM2Q96MH2 286 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 HERC2P3Q9BVR0 1158 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 RHOBTB2Q9BYZ6 727 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM30AQ9NV96 361 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 CYTH4Q9UIA0 394 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 IRAK3Q9Y616 596 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 BZW2Q9Y6E2 419 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 EPN1Q9Y6I3 576 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 OBSL1O75147 1896 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 DOCK6Q96HP0 2047 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 TMCO5BA8MYB1 307 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TULP2O00295 520 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SYN3O14994 580 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ADAM12O43184 909 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 AKR1B10O60218 316 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TBC1D4O60343 1298 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 GABBR2O75899 941 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 OAZ2O95190 189 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 VNN2O95498 520 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CXCL14O95715 111 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CCDC172P0C7W6 258 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SRGAP2BP0DMP2 458 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CTSAP10619 480 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 VDRP11473 427 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 UNGP13051 313 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 PTPN1P18031 435 aaKnown RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TNFAIP3P21580 790 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 PAX3P23760 479 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ANXA13P27216 316 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CYLC1P35663 651 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 LHX1P48742 406 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CACNA2D1P54289 1103 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SLC18A3Q16572 532 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SGO2Q562F6 1265 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 NAA35Q5VZE5 725 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ARHGAP17Q68EM7 881 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SMYD5Q6GMV2 418 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ANKRD54Q6NXT1 300 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 LLGL2Q6P1M3 1020 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 FAM171BQ6P995 826 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SYCE2Q6PIF2 218 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 LCLAT1Q6UWP7 414 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TTC30AQ86WT1 665 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 METTL23Q86XA0 190 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CEP57Q86XR8 500 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ZNF677Q86XU0 584 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 FMNL3Q8IVF7 1028 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 REXO1L1PQ8IX06 675 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 FUKQ8N0W3 1084 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 VPS52Q8N1B4 723 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TTC39CQ8N584 583 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 C1orf131Q8NDD1 294 aaKnown RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 UBA3Q8TBC4 463 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 KIAA1524Q8TCG1 905 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 AUTS2Q8WXX7 1259 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SUSD6Q92537 303 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 MYLPFQ96A32 169 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TRIM44Q96DX7 344 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CYFIP2Q96F07 1278 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 CCDC42Q96M95 316 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TTPALQ9BTX7 342 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 B3GNT5Q9BYG0 378 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 ZBP1Q9H171 429 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 S1PR5Q9H228 398 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 DEF6Q9H4E7 631 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 C11orf16Q9NQ32 467 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 SEPT11Q9NVA2 429 aaKnown RBP8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TJP2Q9UDY2 1190 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TRIM10Q9UDY6 481 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 STK39Q9UEW8 545 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 NAGPAQ9UK23 515 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 TSPAN16Q9UKR8 245 aa8.52□□□□□ -1.05
PCDH9-205ENST00000614931 DSEQ9UL01 958 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms