RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 POU5F1Q01860 360 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 KRT17Q04695 432 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GPS2Q13227 327 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SIX1Q15475 284 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 KYAT1Q16773 422 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CFAP58Q5T655 872 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 DSTYKQ6XUX3 929 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 AGMOQ6ZNB7 445 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 APBB1IPQ7Z5R6 666 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 RNF180Q86T96 592 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SERINC5Q86VE9 423 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ADGRF2Q8IZF7 708 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA6L1Q8N7Z2 621 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 C3orf20Q8ND61 904 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 STKLD1Q8NE28 680 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GSTCDQ8NEC7 633 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 IPO4Q8TEX9 1081 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 ZNF296Q8WUU4 475 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 KBTBD7Q8WVZ9 684 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 VCPIP1Q96JH7 1222 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 GLT1D1Q96MS3 346 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ERP44Q9BS26 406 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PLEKHA5Q9HAU0 1116 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CYP3A43Q9HB55 503 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 FAM53CQ9NYF3 392 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CNTN3Q9P232 1028 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PCDHGC3Q9UN70 934 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ZNF148Q9UQR1 794 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TRIM17Q9Y577 477 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PIRO00625 290 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 HSF2BPO75031 334 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 LRCH4O75427 683 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 RNF8O76064 485 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 LSM8O95777 96 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 IGHA2P01877 340 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ITGB1P05556 798 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 THP07101 528 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ECHS1P30084 290 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 MIPP30301 263 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ADCY8P40145 1251 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SLC1A1P43005 524 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PTGIRP43119 386 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 LPIN1Q14693 890 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PPP6R3Q5H9R7 873 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 MDH1BQ5I0G3 518 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CEP85LQ5SZL2 805 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 NPNTQ6UXI9 565 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 CAPN12Q6ZSI9 719 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 NME8Q8N427 588 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 KCTD6Q8NC69 237 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ADAM32Q8TC27 787 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SENP8Q96LD8 212 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 KCNK16Q96T55 309 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PLVAPQ9BX97 442 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 ZNF518BQ9C0D4 1074 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 SENP6Q9GZR1 1112 aaPredicted RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 SLITRK6Q9H5Y7 841 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TMPRSS4Q9NRS4 437 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 DDX20Q9UHI6 824 aaKnown RBP3.62□□□□□ -1.83
LIG4-205ENST00000614526 DNPEPQ9ULA0 475 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 PLAAQ9Y263 795 aa3.62□□□□□ -1.83
LIG4-205ENST00000614526 TRPM7Q96QT4 1865 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CITO14578 2027 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 TCRBV5S1A1TA0A578 114 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 MYBPHLA2RUH7 354 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SIGLEC16A6NMB1 481 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 F5H423 210 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 GOLGA8MH3BSY2 632 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 FSCN2O14926 492 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 GPR182O15218 404 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PAPSS1O43252 624 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 ATP8B1O43520 1251 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CST8O60676 142 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ECEL1O95672 775 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CD4P01730 458 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HMGCRP04035 888 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 AXLP30530 894 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CHRNA3P32297 505 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HSD17B3P37058 310 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PBX3P40426 434 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SLCO1A2P46721 670 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 LMAN1P49257 510 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ATP1A2P50993 1020 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 MAP3K7CLP57077 242 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PITX1P78337 314 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 INCA1Q0VD86 236 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 MTFR1Q15390 333 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZC3H12AQ5D1E8 599 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 KIAA0319Q5VV43 1072 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 EMBQ6PCB8 327 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 LCLAT1Q6UWP7 414 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZNF771Q7L3S4 317 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZC3H18Q86VM9 953 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 RFX6Q8HWS3 928 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CD302Q8IX05 232 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 MRRFQ96E11 262 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 PEBP4Q96S96 227 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 FMO2Q99518 471 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 TMEM121Q9BTD3 319 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ADAM33Q9BZ11 813 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms