RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MCM9Q9NXL9 1143 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 MAP3K2Q9Y2U5 619 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 AIM2O14862 343 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 H2AFYO75367 372 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 AKAP5P24588 427 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 DRG2P55039 364 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 LVRNQ6Q4G3 990 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF444Q8N0Y2 327 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ENDOVQ8N8Q3 282 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CEP95Q96GE4 821 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FAR2Q96K12 515 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 EPB41L1Q9H4G0 881 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ELOVL6Q9H5J4 265 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 NCKAP5LQ9HCH0 1330 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 UNCXA6NJT0 531 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SPTLC1O15269 473 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF354CQ86Y25 554 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 VPS39Q96JC1 886 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 DOLKQ9UPQ8 538 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TLR2O60603 784 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SLC4A1P02730 911 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 IL4RP24394 825 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SLC1A4P43007 532 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 MAPK11Q15759 364 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TIMM50Q3ZCQ8 353 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 NFATC2IPQ8NCF5 419 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ADCY4Q8NFM4 1077 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 EMILIN2Q9BXX0 1053 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 RUBCNLQ9H714 662 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FAIMQ9NVQ4 179 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 WDR70Q9NW82 654 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 GLS2Q9UI32 602 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KPNA3O00505 521 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 GABBR2O75899 941 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FDFT1P37268 417 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 PURAQ00577 322 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 HIF1AQ16665 826 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CBX6O95503 412 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RARAP10276 462 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 EIF2AK2P19525 551 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PIK3R1P27986 724 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MAPK4P31152 587 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MAPK7Q13164 816 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KNOP1Q1ED39 458 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RASSF6Q6ZTQ3 369 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KCNK18Q7Z418 384 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SUPT20HQ8NEM7 779 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RBM15Q96T37 977 aaKnown RBP eCLIP5.13□□□□□ -1.591e-6■■■□□ 15.4
VPS13D-213ENST00000613099 C9orf16Q9BUW7 83 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 EML4Q9HC35 981 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 COMMD8Q9NX08 183 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GPN3Q9UHW5 284 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 WDR19Q8NEZ3 1342 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PCDH11XQ9BZA7 1347 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CLTCL1P53675 1640 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 B8ZZF3 427 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 E7EWF7 191 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 H7C2Y5 167 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 FCHO1O14526 889 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 IL6P05231 212 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KITP10721 976 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ADSSP30520 456 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CDK9P50750 372 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 HERC3Q15034 1050 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 LONRF1Q17RB8 773 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GALNT7Q86SF2 657 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CLEC4FQ8N1N0 589 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ASB12Q8WXK4 309 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 OXNAD1Q96HP4 312 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 DYRK4Q9NR20 520 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CACNA2D2Q9NY47 1150 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ATRXP46100 2492 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PTPRTO14522 1441 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 C5orf60A6NFR6 353 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 OPLAHO14841 1288 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 GYPCP04921 128 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 QARSP47897 775 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 KPNA1P52294 538 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 RHBDL3P58872 404 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 DMC1Q14565 340 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ARSHQ5FYA8 562 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CENPSQ8N2Z9 138 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SVOPQ8N4V2 548 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 PRAM1Q96QH2 718 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 IRF2BPLQ9H1B7 796 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 C14orf93Q9H972 538 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TDRKHQ9Y2W6 561 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 SSX5O60225 188 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 TAC1P20366 129 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 HADHQ16836 314 aaKnown RBP5.13□□□□□ -1.59
VPS13D-213ENST00000613099 METTL21CQ5VZV1 264 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 STYK1Q6J9G0 422 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 CRTC3Q6UUV7 619 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 POC5Q8NA72 575 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 ANKRD49Q8WVL7 239 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 C8orf48Q96LL4 319 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MKNK1Q9BUB5 465 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MXD3Q9BW11 206 aa5.13□□□□□ -1.59
VPS13D-213ENST00000613099 MRPL47Q9HD33 250 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms