RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 RMND5AQ9H871 391 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 CCNE2O96020 404 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 ME2P23368 584 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 NUP93Q8N1F7 819 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 A0A0G2JPF8 293 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 ARHGEF33A8MVX0 844 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 HNRNPCL3B7ZW38 293 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 HNRNPCL4P0DMR1 293 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 FDFT1P37268 417 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 UBE3AQ05086 875 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 DPYDQ12882 1025 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 EFR3AQ14156 821 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 CCDC81Q6ZN84 652 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 SLC35G2Q8TBE7 412 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 AGAP11Q8TF27 550 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 RNPEPQ9H4A4 650 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 MYO1GB0I1T2 1018 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 LDLRP01130 860 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 KCNA1Q09470 495 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 ALX1Q15699 326 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 GDF3Q9NR23 364 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 STOX2Q9P2F5 926 aaPredicted RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 TSHRP16473 764 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 PRIM2P49643 509 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 PTENP60484 403 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 FAM213AQ9BRX8 229 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 HDHD2Q9H0R4 259 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 RAD54BQ9Y620 910 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 PIPSLA2A3N6 862 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 HUS1O60921 280 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 COILP38432 576 aaPredicted RBP9.09□□□□□ -0.96
TTC28-208ENST00000612946 ITGA8P53708 1063 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 LIN54Q6MZP7 749 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 ZNF790Q6PG37 636 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 RFX8Q6ZV50 586 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 ASB2Q96Q27 587 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 TMEM161AQ9NX61 479 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 APEX2Q9UBZ4 518 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 LEMD3Q9Y2U8 911 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.96
TTC28-208ENST00000612946 CCDC154A6NI56 674 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 MAPRE1Q15691 268 aaKnown RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 LEMD2Q8NC56 503 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 APOPT1Q96IL0 206 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ZSWIM1Q9BR11 485 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 SETBP1Q9Y6X0 1596 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 CDC42BPGQ6DT37 1551 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PLK4O00444 970 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ALOX12P18054 663 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 STIP1P31948 543 aaKnown RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 CLHC1Q8NHS4 586 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 LRRC20Q8TCA0 184 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 AGPAT1Q99943 283 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 EPB41L4AQ9HCS5 686 aaPredicted RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 TSC22D2O75157 780 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ARIH2O95376 493 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 AKR1D1P51857 326 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 CDK16Q00536 496 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 C3orf62Q6ZUJ4 267 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 CYP4Z1Q86W10 505 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 DHFR2Q86XF0 187 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 Q96MT0 163 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 TMEM237Q96Q45 408 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 NUAK2Q9H093 628 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PCDH18Q9HCL0 1135 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PICK1Q9NRD5 415 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 GOLGA8SH3BPF8 625 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 RHOBTB3O94955 611 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ERP29P30040 261 aaKnown RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 FAM83EQ2M2I3 478 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 C16orf62Q7Z3J2 963 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 C8orf59Q8N0T1 100 aaPredicted RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 DHRSXQ8N5I4 330 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 MND1Q9BWT6 205 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PRPF19Q9UMS4 504 aaKnown RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 PNMA6FA0A0J9YX94 578 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PIK3CDO00329 1044 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PEX1O43933 1283 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ABHD2P08910 425 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 UQCRBP14927 111 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 RAB43Q86YS6 212 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 MYLK2Q9H1R3 596 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 TELO2Q9Y4R8 837 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 CHD4Q14839 1912 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 HSF2Q03933 536 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 SGMS1Q86VZ5 419 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 HAVCR1Q96D42 359 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 RBM17Q96I25 401 aaKnown RBP9.08□□□□□ -0.96
TTC28-208ENST00000612946 MEI4A8MW99 385 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 TRAF2Q12933 501 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ARCQ7LC44 396 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 IP6K1Q92551 441 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 PLEKHG4BQ96PX9 1271 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 TCF7L2Q9NQB0 619 aa9.08□□□□□ -0.96
TTC28-208ENST00000612946 ZSCAN32Q9NX65 697 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms