RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MMGT1Q8N4V1 131 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 C12orf29Q8N999 325 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 NOA1Q8NC60 698 aaKnown RBP9.42□□□□□ -0.9
CCDC47-207ENST00000612558 C3orf20Q8ND61 904 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 CD101Q93033 1021 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 C18orf8Q96DM3 657 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 MIS12Q9H081 205 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 CARD9Q9H257 536 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 WDR35Q9P2L0 1181 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 CYTH4Q9UIA0 394 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 L1RE1Q9UN81 338 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 NME7Q9Y5B8 376 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 TCRBV5S1A1TA0A578 114 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CCDC66A2RUB6 948 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TMEM191CA6NGB0 347 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CEP104O60308 925 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PROSCO94903 275 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 POMCP01189 267 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PDGFRBP09619 1106 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 FGFR1P11362 822 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 COL6A1P12109 1028 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 LMO2P25791 158 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CTNNA2P26232 953 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CTNNA1P35221 906 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 GABRB2P47870 512 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PEX5P50542 639 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 GSCP56915 257 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 ZNF268Q14587 947 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CLUL1Q15846 466 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 LLGL2Q6P1M3 1020 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 DNAJC24Q6P3W2 148 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SLC39A5Q6ZMH5 540 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 ANKRD33Q7Z3H0 272 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TMEM86AQ8N2M4 240 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PDCL2Q8N4E4 241 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 UBA3Q8TBC4 463 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TNIP3Q96KP6 325 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SENP8Q96LD8 212 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 UROC1Q96N76 676 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.41□□□□□ -0.93e-7■■□□□ 12.4
CCDC47-207ENST00000612558 TRIM7Q9C029 511 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SYNCQ9H7C4 482 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 EHD2Q9NZN4 543 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 IP6K2Q9UHH9 426 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TTC7AQ9ULT0 858 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PCDHA3Q9Y5H8 950 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CASTOR2A6NHX0 329 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SIGLEC16A6NMB1 481 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 GABRDO14764 452 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PQBP1O60828 265 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 NBNO60934 754 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TUBBP07437 444 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 MAN1A1P33908 653 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 LHX1P48742 406 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SNX16P57768 344 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 RNASE9P60153 205 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 C2orf54Q08AI8 447 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PDCLQ13371 301 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TUSC3Q13454 348 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 GOLGA7BQ2TAP0 167 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 PLEKHG4Q58EX7 1191 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CYP4A22Q5TCH4 519 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 C1orf53Q5VUE5 145 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 WSCD1Q658N2 575 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CCDC70Q6NSX1 233 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 GLB1LQ6UWU2 654 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 DSTYKQ6XUX3 929 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 IPO4Q8TEX9 1081 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 STK32AQ8WU08 396 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SEPT8Q92599 483 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 ALG3Q92685 438 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 KRT35Q92764 455 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 ZNF333Q96JL9 665 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TOX2Q96NM4 488 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 CPXM1Q96SM3 734 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 NAP1L3Q99457 506 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 DPEP3Q9H4B8 488 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 ELAC1Q9H777 363 aaKnown RBP9.41□□□□□ -0.9
CCDC47-207ENST00000612558 FAM49BQ9NUQ9 324 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 SMARCAL1Q9NZC9 954 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 HESX1Q9UBX0 185 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 INPP5FQ9Y2H2 1132 aa9.41□□□□□ -0.9
CCDC47-207ENST00000612558 TDRD15B5MCY1 1934 aaKnown RBP9.4□□□□□ -0.9
CCDC47-207ENST00000612558 DCDC2CA8MYV0 355 aa9.4□□□□□ -0.9
CCDC47-207ENST00000612558 ENPP3O14638 875 aa9.4□□□□□ -0.9
CCDC47-207ENST00000612558 B3GAT3O94766 335 aa9.4□□□□□ -0.9
CCDC47-207ENST00000612558 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.9
CCDC47-207ENST00000612558 ERBB2P04626 1255 aa9.4□□□□□ -0.9
CCDC47-207ENST00000612558 PFKMP08237 780 aa9.4□□□□□ -0.9
CCDC47-207ENST00000612558 RHOXF2BP0C7M4 288 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms