RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 STIM1Q13586 685 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 ZNF268Q14587 947 aaPredicted RBP16.1■□□□□ 0.17
LMBR1-220ENST00000609081 STXBP5Q5T5C0 1151 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 TPRG1Q6ZUI0 275 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 TMEM150AQ86TG1 271 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 SCN4BQ8IWT1 228 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 B3GALNT2Q8NCR0 500 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 BPIFB1Q8TDL5 484 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 CSGALNACT1Q8TDX6 532 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 C8orf48Q96LL4 319 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 BCO2Q9BYV7 579 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 LTB4R2Q9NPC1 389 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 DLGAP2Q9P1A6 1054 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
LMBR1-220ENST00000609081 PCDHA5Q9Y5H7 936 aa16.1■□□□□ 0.17
LMBR1-220ENST00000609081 TICRRQ7Z2Z1 1910 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 COL4A2P08572 1712 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 HCRTO43612 131 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
LMBR1-220ENST00000609081 BDNFP23560 247 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 PIK3CAP42336 1068 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 PRCPP42785 496 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 RPS9P46781 194 aaKnown RBP16.09■□□□□ 0.17
LMBR1-220ENST00000609081 GPR15P49685 360 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 CYP4F8P98187 520 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 FKBP3Q00688 224 aaKnown RBP16.09■□□□□ 0.17
LMBR1-220ENST00000609081 UBXN2BQ14CS0 331 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 DENND5BQ6ZUT9 1274 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 UNC93AQ86WB7 457 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 ATOH1Q92858 354 aaPredicted RBP16.09■□□□□ 0.17
LMBR1-220ENST00000609081 SLC46A2Q9BY10 475 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 FAM124BQ9H5Z6 455 aaPredicted RBP16.09■□□□□ 0.17
LMBR1-220ENST00000609081 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
LMBR1-220ENST00000609081 TMEM8AQ9HCN3 771 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 HEBP1Q9NRV9 189 aa16.09■□□□□ 0.17
LMBR1-220ENST00000609081 FAM170BA6NMN3 283 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 H0Y858 1186 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 ARNTLO00327 626 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 PSMA7O14818 248 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 SLC16A3O15427 465 aaKnown RBP16.08■□□□□ 0.16
LMBR1-220ENST00000609081 HLA-DRAP01903 254 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 CDR1P51861 262 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 NOP14P78316 857 aaKnown RBP16.08■□□□□ 0.16
LMBR1-220ENST00000609081 C1orf220Q5T0J3 134 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 KRT39Q6A163 491 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 FOXR2Q6PJQ5 311 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 TTC39CQ8N584 583 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 CLDN23Q96B33 292 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 TTLL2Q9BWV7 592 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 FOXQ1Q9C009 403 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 SMYD3Q9H7B4 428 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 CYP3A43Q9HB55 503 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 TDP1Q9NUW8 608 aa16.08■□□□□ 0.16
LMBR1-220ENST00000609081 ANAPC1Q9H1A4 1944 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 PROB1E7EW31 1015 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 DCNP07585 359 aaKnown RBP16.07■□□□□ 0.16
LMBR1-220ENST00000609081 USP17L7P0C7H9 530 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 ANGPT1Q15389 498 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 CCDC142Q17RM4 750 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 SDHAF4Q5VUM1 108 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 C1orf210Q8IVY1 113 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 ZC3H3Q8IXZ2 948 aaKnown RBP16.07■□□□□ 0.16
LMBR1-220ENST00000609081 SMYD4Q8IYR2 804 aaPredicted RBP16.07■□□□□ 0.16
LMBR1-220ENST00000609081 ADSSL1Q8N142 457 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 RSPRY1Q96DX4 576 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
LMBR1-220ENST00000609081 CHMP5Q9NZZ3 219 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 NME7Q9Y5B8 376 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 PIAS3Q9Y6X2 628 aa16.07■□□□□ 0.16
LMBR1-220ENST00000609081 KIF26AQ9ULI4 1882 aaPredicted RBP16.07■□□□□ 0.16
LMBR1-220ENST00000609081 CACNA1IQ9P0X4 2223 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 NCANO14594 1321 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 TRAV19A0A0A6YYK7 116 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 RTN3O95197 1032 aaPredicted RBP16.06■□□□□ 0.16
LMBR1-220ENST00000609081 PRAMEF12O95522 483 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 NBL1P41271 181 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 ASPAP45381 313 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 GCLMP48507 274 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 CDH8P55286 799 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 PPP3CAQ08209 521 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 INCA1Q0VD86 236 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 TXNDC8Q6A555 127 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 RALGPS2Q86X27 583 aaPredicted RBP16.06■□□□□ 0.16
LMBR1-220ENST00000609081 CRYBG2Q8N1P7 616 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 KIAA1958Q8N8K9 716 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 PDZD8Q8NEN9 1154 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 FAM3CQ92520 227 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 SMARCD1Q96GM5 515 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 SLITRK1Q96PX8 696 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 DPEP3Q9H4B8 488 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 COMMD8Q9NX08 183 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 TRPM5Q9NZQ8 1165 aa16.06■□□□□ 0.16
LMBR1-220ENST00000609081 F8VP50 259 aa16.05■□□□□ 0.16
LMBR1-220ENST00000609081 TADA3O75528 432 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms