RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 MAPK13O15264 365 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
CTSA-210ENST00000606000 PSMC2P35998 433 aaKnown RBP13.11□□□□□ -0.31
CTSA-210ENST00000606000 GRIK1P39086 918 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 MAGEA11P43364 429 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 ASPAP45381 313 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 FCHO2Q0JRZ9 810 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 ANGPT1Q15389 498 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 B3GALNT2Q8NCR0 500 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 TAS1R2Q8TE23 839 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 SHDQ96IW2 340 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 RMND1Q9NWS8 449 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 NDRG2Q9UN36 371 aaKnown RBP13.11□□□□□ -0.31
CTSA-210ENST00000606000 C2orf78A6NCI8 922 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 FAM170BA6NMN3 283 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 KRT13P13646 458 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 MRE11P49959 708 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 NUBP1P53384 320 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 TNK2Q07912 1038 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 EDRF1Q3B7T1 1238 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 CMTM8Q8IZV2 173 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 IRF7Q92985 503 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 TRMT2BQ96GJ1 504 aaKnown RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 CCDC34Q96HJ3 373 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 MYRFLQ96LU7 910 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 CYP2S1Q96SQ9 504 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 TRPC7Q9HCX4 862 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 GTSE1Q9NYZ3 720 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 PIAS3Q9Y6X2 628 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
CTSA-210ENST00000606000 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
CTSA-210ENST00000606000 BIN1O00499 593 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 DPYSL4O14531 572 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 IKBKBO14920 756 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 SMC2O95347 1197 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 CCDC130P13994 396 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 BMP6P22004 513 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 ANXA13P27216 316 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 NDST1P52848 882 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
CTSA-210ENST00000606000 FZD5Q13467 585 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
CTSA-210ENST00000606000 SGSM1Q2NKQ1 1148 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 PAQR9Q6ZVX9 377 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 BPIFB1Q8TDL5 484 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
CTSA-210ENST00000606000 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 KCNK16Q96T55 309 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
CTSA-210ENST00000606000 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
CTSA-210ENST00000606000 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 TRIM66O15016 1216 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 CHADO15335 359 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 FAM163BP0C2L3 166 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 EPB41P11171 864 aaKnown RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 CD58P19256 250 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 CCNE1P24864 410 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 WEE1P30291 646 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 AVPR1AP37288 418 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 TXNDC11Q6PKC3 985 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 ZNF852Q6ZMS4 543 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 DENND5BQ6ZUT9 1274 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 MON1AQ86VX9 555 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 FUKQ8N0W3 1084 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 ZNF687Q8N1G0 1237 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 ARL14EPQ8N8R7 260 aaPredicted RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 CSGALNACT1Q8TDX6 532 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 FAM3CQ92520 227 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 BCO2Q9BYV7 579 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms