RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 FAM102AQ5T9C2 384 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NPNTQ6UXI9 565 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RELL1Q8IUW5 271 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 EXOC8Q8IYI6 725 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LRRN4Q8WUT4 740 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PRCCQ92733 491 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PRMT7Q9NVM4 692 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RASSF9O75901 435 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 IL18RAPO95256 599 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MAP3K6O95382 1288 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CYP3A5P20815 502 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FOXN2P32314 431 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RGS7P49802 495 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SLC26A2P50443 739 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NDST1P52848 882 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 WDR4P57081 412 aaKnown RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRNP1Q6NT89 227 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM47EQ6ZV65 393 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRPM8Q7Z2W7 1104 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RFX6Q8HWS3 928 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NLRP7Q8WX94 980 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PEBP4Q96S96 227 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KDM4CQ9H3R0 1056 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LRRC37A2A6NM11 1700 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KRT15P19012 456 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 OSBPP22059 807 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MORF4L2Q15014 288 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HADHQ16836 314 aaKnown RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TAPT1Q6NXT6 567 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 POLNQ7Z5Q5 900 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CPT1BQ92523 772 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ACTR5Q9H9F9 607 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PCDH9Q9HC56 1237 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KLC4Q9NSK0 619 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRIP11Q15643 1979 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 A0A1W2PPM1 405 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KRT7P08729 469 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RPL22P35268 128 aaKnown RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GPX6P59796 221 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ATP11AP98196 1134 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPIL2Q13356 520 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LACTB2Q53H82 288 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FUKQ8N0W3 1084 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CCHCR1Q8TD31 782 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LPIN3Q9BQK8 851 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MROH8Q9H579 483 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NKIRAS1Q9NYS0 192 aa12.38□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 E5RJQ4 531 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ALOX15BO15296 676 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ADORA2AP29274 412 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PTPN7P35236 360 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MNAT1P51948 309 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ITIH4Q14624 930 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TMEM132DQ14C87 1099 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HIF1AQ16665 826 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MAMDC4Q6UXC1 1216 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 BBS12Q6ZW61 710 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRABD2AQ86V40 505 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NSRP1Q9H0G5 558 aaKnown RBP12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SCN1AP35498 2009 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPEF2O14830 753 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RNF8O76064 485 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 UBOX5O94941 541 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CENPUQ71F23 418 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SPATA18Q8TC71 538 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TSPAN16Q9UKR8 245 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HES2Q9Y543 173 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CLUHO75153 1309 aa12.37□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FAM47DPA6NHR8 397 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TMEM63AO94886 807 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRUB2O95900 331 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ABHD2P08910 425 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RBP3P10745 1247 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MCF2P10911 925 aa12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 EIF3EP60228 445 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 BASP1P80723 227 aaKnown RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZNF268Q14587 947 aaPredicted RBP12.36□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KIZQ2M2Z5 673 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms