RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GLI1P08151 1106 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 UBTFL6P0CB48 400 aaPredicted RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 IGFBP4P22692 258 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 VHLP40337 213 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 TMPOP42166 694 aaKnown RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 ME1P48163 572 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 PLCD1P51178 756 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 TKTL1P51854 596 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 VAV2P52735 878 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 PPP2R2AP63151 447 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 SF3A3Q12874 501 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 TUBA3CQ13748 450 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 NFE2L1Q14494 772 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 MAPKAPK3Q16644 382 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF674Q2M3X9 581 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 C15orf59Q2T9L4 293 aaPredicted RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 AARDQ4LEZ3 155 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 SH3PXD2AQ5TCZ1 1133 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 WDR73Q6P4I2 378 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 KLHL35Q6PF15 583 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 COL23A1Q86Y22 540 aaPredicted RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 PLBD2Q8NHP8 589 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 TRPM4Q8TD43 1214 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 GATA6Q92908 595 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 EXT2Q93063 718 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 FERMT2Q96AC1 680 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 NMD3Q96D46 503 aaKnown RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 HSPBAP1Q96EW2 488 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 FAM20AQ96MK3 541 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 NUDCD1Q96RS6 583 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 TUBA1CQ9BQE3 449 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 RIOK1Q9BRS2 568 aaKnown RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 ADNPQ9H2P0 1102 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 SNX25Q9H3E2 840 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 XAB2Q9HCS7 855 aaKnown RBP4.95□□□□□ -1.62
LINC01109-201ENST00000603837 CNGB3Q9NQW8 809 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 HPF1Q9NWY4 346 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 AIPL1Q9NZN9 384 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 MYH13Q9UKX3 1938 aa4.95□□□□□ -1.62
LINC01109-201ENST00000603837 RGPD8O14715 1765 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF536O15090 1300 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CDC14CA4D256 554 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 RGSL1A5PLK6 1076 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 B2RBV5 119 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 GCOM1H8Y6P7 765 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 SGK1O00141 431 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 KRIT1O00522 736 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ASAP2O43150 1006 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 B4GALT4O60513 344 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 GLRX3O76003 335 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ABLIM3O94929 683 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ATP1A1P05023 1023 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 MYZAPP0CAP1 466 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CHRNB1P11230 501 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ABCB4P21439 1286 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 MPSTP25325 297 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TARSP26639 723 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CASP14P31944 242 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 SERPINB6P35237 376 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ADH7P40394 386 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CDK7P50613 346 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 HADHBP55084 474 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF252P-AS1Q0IIN9 211 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 STK38Q15208 465 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 EZH2Q15910 746 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 NDUFA5Q16718 116 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 GSTA3Q16772 222 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 MYLK3Q32MK0 819 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 INTS11Q5TA45 600 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 SIGIRRQ6IA17 410 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CYP4F22Q6NT55 531 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 GALNT7Q86SF2 657 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 FMR1NBQ8N0W7 255 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 MMGT1Q8N4V1 131 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 AFAP1L2Q8N4X5 818 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 DDHD1Q8NEL9 900 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PPP1R35Q8TAP8 253 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PIP4K2CQ8TBX8 421 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PIGOQ8TEQ8 1089 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 NRBF2Q96F24 287 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PPM1MQ96MI6 270 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CCDC113Q9H0I3 377 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 SIRPGQ9P1W8 387 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TRPS1Q9UHF7 1281 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 FAM153AQ9UHL3 310 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 RCOR1Q9UKL0 485 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 USP20Q9Y2K6 914 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CYP46A1Q9Y6A2 500 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 AP1M2Q9Y6Q5 423 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ATP10DQ9P241 1426 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 SRCAPQ6ZRS2 3230 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TMEM94Q12767 1356 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 A0A0G2JPF8 293 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ANKRD34BA5PLL1 514 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 HNRNPCL3B7ZW38 293 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 H3BM21 787 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 H3BQV1 296 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 EML1O00423 815 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PSMD14O00487 310 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms