RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 DDX6P26196 483 aaKnown RBP eCLIP23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 WEE1P30291 646 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 KRT39Q6A163 491 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 RSPRY1Q96DX4 576 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 CEP295NLQ96MC4 621 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 ELOVL4Q9GZR5 314 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 SIT1Q9Y3P8 196 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 TRIM49BA6NDI0 452 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 CCNE1P24864 410 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 MCCD1P59942 119 aaPredicted RBP23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 TCF15Q12870 199 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 ZC3H3Q8IXZ2 948 aaKnown RBP23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 CMTM8Q8IZV2 173 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 MAB21L3Q8N8X9 362 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 B3GNT5Q9BYG0 378 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 FOXQ1Q9C009 403 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 ZNF518BQ9C0D4 1074 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 HEBP1Q9NRV9 189 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 OBP2AQ9NY56 170 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 NCANO14594 1321 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 ATP8B3O60423 1300 aa23.3■■□□□ 1.32
PPFIA3-208ENST00000602726 KANSL1LA0AUZ9 987 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 SOBPA7XYQ1 873 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 F8VP50 259 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 BIN1O00499 593 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 CLDN5O00501 218 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 PRAMEF12O95522 483 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 AVPR1AP37288 418 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 ASPAP45381 313 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 MXI1P50539 228 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 NDST1P52848 882 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 NOP14P78316 857 aaKnown RBP23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 NHLH1Q02575 133 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 DCAF17Q5H9S7 520 aaPredicted RBP23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 TCERG1LQ5VWI1 586 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 TXNDC8Q6A555 127 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 KLHL10Q6JEL2 608 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 TPRG1Q6ZUI0 275 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 DENND5BQ6ZUT9 1274 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 MON1AQ86VX9 555 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 C8orf48Q96LL4 319 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 MED10Q9BTT4 135 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 SMG9Q9H0W8 520 aaKnown RBP23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 EHD2Q9NZN4 543 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 PTPRDP23468 1912 aa23.29■■□□□ 1.32
PPFIA3-208ENST00000602726 CD44P16070 742 aaKnown RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 TRIM21P19474 475 aaKnown RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 FCHO2Q0JRZ9 810 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 MORC3Q14149 939 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 ACOT1Q86TX2 421 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 UNC93AQ86WB7 457 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 CCDC105Q8IYK2 499 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 CELF5Q8N6W0 485 aaKnown RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 PJA1Q8NG27 643 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 DDX23Q9BUQ8 820 aaKnown RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 BCO2Q9BYV7 579 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 NIF3L1Q9GZT8 377 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 IRF2BPLQ9H1B7 796 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 CYP3A43Q9HB55 503 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 APOBEC3GQ9HC16 384 aaKnown RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 TRPV5Q9NQA5 729 aa23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 ARMCX3Q9UH62 379 aaPredicted RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 NUP210Q8TEM1 1887 aaPredicted RBP23.28■■□□□ 1.32
PPFIA3-208ENST00000602726 F5P12259 2224 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 CHADO15335 359 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 TADA3O75528 432 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 DCNP07585 359 aaKnown RBP23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 BMP6P22004 513 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 UBXN2BQ14CS0 331 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 ZNF852Q6ZMS4 543 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 DTWD2Q8NBA8 298 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 FBXL13Q8NEE6 735 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 BPIFB1Q8TDL5 484 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 CSGALNACT1Q8TDX6 532 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 LRRC3BQ96PB8 259 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 TRPC7Q9HCX4 862 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 DENND4CQ5VZ89 1909 aa23.27■■□□□ 1.32
PPFIA3-208ENST00000602726 PPP1R3GB7ZBB8 358 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 CD72P21854 359 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 CACNA2D1P54289 1103 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 ORC1Q13415 861 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 ARHGAP29Q52LW3 1261 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 FAM35AQ86V20 835 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 CRYBG2Q8N1P7 616 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 NELFBQ8WX92 580 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 SEMA4DQ92854 862 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 CEP63Q96MT8 703 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 TDP1Q9NUW8 608 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 THG1LQ9NWX6 298 aaKnown RBP23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 RAB20Q9NX57 234 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 HMGXB4Q9UGU5 601 aa23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 MRPS17Q9Y2R5 130 aaKnown RBP23.26■■□□□ 1.31
PPFIA3-208ENST00000602726 BICDL2A1A5D9 508 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 FAM170BA6NMN3 283 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 H0Y858 1186 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 MAN2B1O00754 1011 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 USP46P62068 366 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 INCA1Q0VD86 236 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 CAMK4Q16566 473 aa23.25■■□□□ 1.31
PPFIA3-208ENST00000602726 WDR44Q5JSH3 913 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms