RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CLYBLQ8N0X4 340 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TCAIMQ8N3R3 496 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MAGEB6Q8N7X4 407 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF680Q8NEM1 530 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 RMND5BQ96G75 393 aaPredicted RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PRMT1Q99873 361 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 C1QTNF7Q9BXJ2 289 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF717Q9BY31 904 aaPredicted RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TP63Q9H3D4 680 aaPredicted RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 KCTD10Q9H3F6 313 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 VPS37BQ9H9H4 285 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 INTS7Q9NVH2 962 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 THG1LQ9NWX6 298 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MED23Q9ULK4 1368 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 CCRL2O00421 344 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 E2F3O00716 465 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MAPK13O15264 365 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MTSS1O43312 755 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 EXOC3O60645 756 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TSC22D2O75157 780 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 USP1O94782 785 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 SNAPINO95295 136 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ASS1P00966 412 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PDE6AP16499 860 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PCSK2P16519 638 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ITGA2P17301 1181 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 VAMP1P23763 118 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 ECHS1P30084 290 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 GRIK1P39086 918 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PHKA1P46020 1223 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 RAP1GDS1P52306 607 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PHC1P78364 1004 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MTFR1Q15390 333 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TBRG1Q3YBR2 411 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 VWA5B1Q5TIE3 1220 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 PGM2L1Q6PCE3 622 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 CYB5R4Q7L1T6 521 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 CCDC84Q86UT8 332 aaPredicted RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 KIAA2013Q8IYS2 634 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 NECAB1Q8N987 351 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 DHX38Q92620 1227 aaKnown RBP9.24□□□□□ -0.93
COMMD3-215ENST00000602574 HPS1Q92902 700 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 TMEM168Q9H0V1 697 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MYLK2Q9H1R3 596 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 EBF3Q9H4W6 596 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 VPS45Q9NRW7 570 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 GTF2IRD1Q9UHL9 959 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 EDARQ9UNE0 448 aa9.24□□□□□ -0.93
COMMD3-215ENST00000602574 MYO5BQ9ULV0 1848 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 CRB1P82279 1406 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 A6NJY4 79 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 BTBD18B2RXH4 712 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 STX16-NPEPL1H3BU86 382 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 AXIN1O15169 862 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 BUD23O43709 281 aaKnown RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 GATCO43716 136 aaKnown RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 FKBP6O75344 327 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 CSDE1O75534 798 aaKnown RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 DNAJB5O75953 348 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 ARIH2O95376 493 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 ANPEPP15144 967 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TYK2P29597 1187 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 PRDX6P30041 224 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 HOXA6P31267 233 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 CYLC1P35663 651 aaPredicted RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 BMPR1AP36894 532 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 STT3AP46977 705 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 CASP5P51878 434 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TNNC1P63316 161 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 IRX4P78413 519 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TRIM32Q13049 653 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TARDBPQ13148 414 aaKnown RBP eCLIP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 STX3Q13277 289 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TRIM16LQ309B1 348 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF792Q3KQV3 632 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 FAM209BQ5JX69 171 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TTC39AQ5SRH9 613 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 GRTP1Q5TC63 336 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 NT5DC1Q5TFE4 455 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 FAM180BQ6P0A1 224 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 BEND4Q6ZU67 534 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 STK32CQ86UX6 486 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 C12orf56Q8IXR9 622 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 MB21D2Q8IYB1 491 aaPredicted RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 ASCC1Q8N9N2 400 aaKnown RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 SSH3Q8TE77 659 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 CAPSLQ8WWF8 208 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 RILPL2Q969X0 211 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TXNDC15Q96J42 360 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 PHACTR3Q96KR7 559 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 ART5Q96L15 291 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 TTC25Q96NG3 672 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 SNX18Q96RF0 628 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 NUSAP1Q9BXS6 441 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms