RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 HBS1LQ9Y450 684 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 A8MXQ7 604 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TLR2O60603 784 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 KCNJ1P48048 391 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ACTR2P61160 394 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ORC2Q13416 577 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 MIER2Q8N344 545 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 AGPAT1Q99943 283 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 SEMA6AQ9H2E6 1030 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 XPO7Q9UIA9 1087 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 MINPP1Q9UNW1 487 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RGS20O76081 388 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 GPSM2P81274 684 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TAP1Q03518 808 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TSC22D1Q15714 1073 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RGS21Q2M5E4 152 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 FUT11Q495W5 492 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ZBTB49Q6ZSB9 765 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 LRRC6Q86X45 466 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ATL2Q8NHH9 583 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 SCFD1Q8WVM8 642 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ADGRA2Q96PE1 1338 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 O00370 1275 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 C21orf2O43822 256 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 PEX1O43933 1283 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 CROCCP3Q8IVE0 287 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RTKN2Q8IZC4 609 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ABCB10Q9NRK6 738 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TNFAIP8O95379 198 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 YWHABP31946 246 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM69Q86WT6 500 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RIBC1Q8N443 379 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 PYDC1Q8WXC3 89 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM54Q9BYV2 358 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TDRD3Q9H7E2 651 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 CD209Q9NNX6 404 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TAGLN3Q9UI15 199 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 E9PCH4 1651 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 MROH7Q68CQ1 1323 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 SULT1E1P49888 294 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 CHN2P52757 468 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 TRMT5Q32P41 509 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 MARK2Q7KZI7 788 aaKnown RBP9.03□□□□□ -0.96
CSMD1-216ENST00000602557 FGD2Q7Z6J4 655 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 RASA2Q15283 850 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 SMTNL2Q2TAL5 461 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 WNK4Q96J92 1243 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 ELMO2Q96JJ3 720 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 SH2D3AQ9BRG2 576 aa9.03□□□□□ -0.96
CSMD1-216ENST00000602557 GYPCP04921 128 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 CCR3P51677 355 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 ARPC4P59998 168 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 COX10Q12887 443 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 ENOSF1Q7L5Y1 443 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 SAPCD2Q86UD0 394 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 UNC45BQ8IWX7 931 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 MADDQ8WXG6 1647 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 CALB2P22676 271 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 PTPN4P29074 926 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 HSD17B4P51659 736 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 BTBD8Q5XKL5 378 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 CCDC28BQ9BUN5 200 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 C2orf40Q9H1Z8 148 aa9.02□□□□□ -0.96
CSMD1-216ENST00000602557 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 GHRP10912 638 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 C4BPBP20851 252 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 KIZQ2M2Z5 673 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 RCOR2Q8IZ40 523 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 DPYSL4O14531 572 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TFRCP02786 760 aaKnown RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 NR1I3Q14994 352 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TMEM132DQ14C87 1099 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 KRT72Q14CN4 511 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 CARTPTQ16568 116 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TRIM71Q2Q1W2 868 aaKnown RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 USP13Q92995 863 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 MASTLQ96GX5 879 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 DDX50Q9BQ39 737 aaKnown RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TMEM117Q9H0C3 514 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 PCDHGB4Q9UN71 923 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 CLCA2Q9UQC9 943 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 A0A1W2PQC6 194 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 H7C1W4 665 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TSPAN4O14817 238 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 GRIK1P39086 918 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 ZSWIM7Q19AV6 140 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 IARS2Q9NSE4 1012 aaKnown RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 ATF5Q9Y2D1 282 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 ADGRL3Q9HAR2 1447 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TOMM70O94826 608 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 SDE2Q6IQ49 451 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms