RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	PROB1	E7EW31	1015 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	MAN2B1	O00754	1011 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	PTPN1	P18031	435 aa	Known RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	RPL13	P26373	211 aa	Known RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	NBL1	P41271	181 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	MAGEA9	P43362	315 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	MLLT6	P55198	1093 aa	Predicted RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	ADAM9	Q13443	819 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	SGSM1	Q2NKQ1	1148 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	EDRF1	Q3B7T1	1238 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	ARHGAP29	Q52LW3	1261 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	COBLL1	Q53SF7	1204 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	INTS8	Q75QN2	995 aa	Known RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	MON1A	Q86VX9	555 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	FAM186B	Q8IYM0	893 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF687	Q8N1G0	1237 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	CELF5	Q8N6W0	485 aa	Known RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	MAB21L3	Q8N8X9	362 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	B3GALNT2	Q8NCR0	500 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	SPATA20	Q8TB22	786 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	BPIFB1	Q8TDL5	484 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	TAF4B	Q92750	862 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	CLDN23	Q96B33	292 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	GSDMA	Q96QA5	445 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	BCO2	Q9BYV7	579 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	SDCBP2	Q9H190	292 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	RMND1	Q9NWS8	449 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	MRPS17	Q9Y2R5	130 aa	Known RBP	13.23	□□□□□ -0.29
STRN4-223	ENST00000602223	TRIM66	O15016	1216 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	ASS1	P00966	412 aa	Known RBP	13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	HLA-DRA	P01903	254 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	PSMC2	P35998	433 aa	Known RBP	13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	AVPR1A	P37288	418 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	GRIK1	P39086	918 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	RAP1GAP	P47736	663 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	CDH8	P55286	799 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	MCCD1	P59942	119 aa	Predicted RBP	13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	FZD5	Q13467	585 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	TXNDC8	Q6A555	127 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	SCARA5	Q6ZMJ2	495 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	C1orf210	Q8IVY1	113 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	CSGALNACT1	Q8TDX6	532 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	USP13	Q92995	863 aa	Predicted RBP	13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	ELMO3	Q96BJ8	720 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	MSANTD3	Q96H12	275 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	C8orf48	Q96LL4	319 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	ELOVL4	Q9GZR5	314 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	SMG9	Q9H0W8	520 aa	Known RBP	13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	KIF9	Q9HAQ2	790 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	PIAS3	Q9Y6X2	628 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	FAM186A	A6NE01	2351 aa		13.22	□□□□□ -0.29
STRN4-223	ENST00000602223	MYOF	Q9NZM1	2061 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	NCAM2	O15394	837 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	CLSTN1	O94985	981 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	SMC2	O95347	1197 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	TRIM49	P0CI25	452 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	TRIM49C	P0CI26	452 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	KRT13	P13646	458 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	P4HA1	P13674	534 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	ANXA13	P27216	316 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	PIK3CA	P42336	1068 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	PRCP	P42785	496 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	RPS9	P46781	194 aa	Known RBP	13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	CACNA2D1	P54289	1103 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	PLCB2	Q00722	1185 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	PPP3CA	Q08209	521 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF268	Q14587	947 aa	Predicted RBP	13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	C1orf228	Q6PIY5	440 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	DENND5B	Q6ZUT9	1274 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	FAM3C	Q92520	227 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	SMARCE1	Q969G3	411 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	ZFYVE19	Q96K21	471 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	TTLL2	Q9BWV7	592 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	B3GNT5	Q9BYG0	378 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF518B	Q9C0D4	1074 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	TDP1	Q9NUW8	608 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	TMEM30A	Q9NV96	361 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	HOOK1	Q9UJC3	728 aa	Known RBP	13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	CCL26	Q9Y258	94 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	PCDHA5	Q9Y5H7	936 aa		13.21	□□□□□ -0.29
STRN4-223	ENST00000602223	RIF1	Q5UIP0	2472 aa	Known RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223		F8VP50	259 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	CLDN5	O00501	218 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	CETN3	O15182	167 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	CCNE1	P24864	410 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	ASPA	P45381	313 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	GCLM	P48507	274 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	USP46	P62068	366 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	NOP14	P78316	857 aa	Known RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	SPOPL	Q6IQ16	392 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	RIN3	Q8TB24	985 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	TAS1R2	Q8TE23	839 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	ERCC4	Q92889	916 aa	Predicted RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms